BAC Information

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BAC

Clone NameB6Ng01-332K09
Chromosome7 (Build37)
Map Location 125,007,528 - 125,143,924
singlet/doubletdoublet
Overlap geneLOC669758
Upstream geneXylt1
Downstream geneRps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-332K09.bB6Ng01-332K09.g
ACCGA118691GA118692
length1051,109
definitionB6Ng01-332K09.b B6Ng01-332K09.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,007,528 - 125,007,632)(125,142,808 - 125,143,924)
sequence
caagcaggactagacagatgggtcagtggttaagagcacttgctgctctt
gctgaggacttgagtttggatcccagcactcaagctctggggtggggggg
ggggg
gaattcctggcctcttcactaattggatggaatttggacatgaacaagag
agaatcccatgtaaatgttaagcaaagtttactggttaaggaatgccaaa
gatgatccagacaaccagaagacatgaaaaaggcaagaacaggatttttt
gaacagtcctctaaagaaactcacaagggtttagactaatagcatccggg
cctttgatacaacatgttccagtattttaaaccacttgctgtatggtttc
ctgttcaagcagccctggccaagtgatagggagacttgccaatgaggtct
gtctcagtgtgaatatttacttggaagatgttagacttgagtttctagac
ccggtatcttgagtttgaattcaggtgagttatttgggaaattacttgtc
tcaaggattccagtttccttcatatgaaataaagtggggggaagatgtga
gtttaggtctgatgctatgtatgtatgatgaaatgagatacggattgaag
cctgtatatttattatcacagtaaggatttgatgggggtaggagctccca
cagtgattatcagttacaatgggcaacattttctgagcacaaagcagacc
tctacaaccttttattttgaaatcctttctggaccacacagagtcaatgg
ctgaactttctccttttgacctctgctcttcagtctggtgttctggagtt
tgaatccagtcctttaacctctccctataaattgagacttggtttaaaat
tgatgaacaagacaatgaacttacagtccccacctgaggaaagtaaggtg
gcttgaaaacctgaataggaatttggaatccgtagaagactgatcaggat
cacaaactcgtttcagactcaaatgacatagcatttattgaaatccaagg
gtgaaaggcgagggcctggccaaggtgttgttattttggcatctcctgag
cagagaggggctgatgatgacatttccatgataacttctcacagtgcatc
cacgtggctaaatcaccctacattacctttaaattctgtaagttaggtaa
taatactgtacccacttacagcagaaaaccgaggtgcctgagtgttgagt
agcttgtct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_125007528_125007632
seq2: B6Ng01-332K09.b_52_156

seq1  CAAGCAGGACTAGACAGATGGGTCAGTGGTTAAGAGCACTTGCTGCTCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCAGGACTAGACAGATGGGTCAGTGGTTAAGAGCACTTGCTGCTCTT  50

seq1  GCTGAGGACTTGAGTTTGGATCCCAGCACTCAAGCTCTGGGGTGGGGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGACTTGAGTTTGGATCCCAGCACTCAAGCTCTGGGGTGGGGGGG  100

seq1  GGGGG  105
      |||||
seq2  GGGGG  105

seq1: chr7_125142808_125143924
seq2: B6Ng01-332K09.g_67_1175 (reverse)

seq1  AGACAAGCTACTCAACCACTCA-GCACCTCGGTTTTTCTGCTGTAAAGTG  49
      ||||||||||||||| |||||| ||||||||| ||||||||||| |||||
seq2  AGACAAGCTACTCAA-CACTCAGGCACCTCGG-TTTTCTGCTGT-AAGTG  47

seq1  GGTACAGTATTATTACCTAACTTACAGAATTTTAAAGGGTAATTGTAGGG  99
      ||||||||||||||||||||||||||||||||  || ||||| |||||||
seq2  GGTACAGTATTATTACCTAACTTACAGAATTT--AAAGGTAA-TGTAGGG  94

seq1  TGATTTAGCCCACGGTGGGATGCACTGTGAGAAGTTATCATGGAATTGTC  149
      |||||||| |||||   |||||||||||||||||||||||||||| ||||
seq2  TGATTTAG-CCACG--TGGATGCACTGTGAGAAGTTATCATGGAAATGTC  141

seq1  ATCACCAGCCCCCTTCTCTGCTCAGGAGATGCCAAAAATACCACACCTTG  199
      |||| |||||||  |||||||||||||||||||||||  || ||||||||
seq2  ATCATCAGCCCC--TCTCTGCTCAGGAGATGCCAAAATAACAACACCTTG  189

seq1  GCCAGGCCCTCGCC-TTCACCCTTGGATTTCAATAAATGCTATGTCATTT  248
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GCCAGGCCCTCGCCTTTCACCCTTGGATTTCAATAAATGCTATGTCATTT  239

seq1  GAGTCTG-AACGAGTTTGTGATCCTGATCAGTCTTCTACGGATTCCAAAT  297
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGAAACGAGTTTGTGATCCTGATCAGTCTTCTACGGATTCCAAAT  289

seq1  TCCTATTCAGGTTTTCAAGCCACCTTACTTTCCTCAGGTGGGGACTGTAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTATTCAGGTTTTCAAGCCACCTTACTTTCCTCAGGTGGGGACTGTAA  339

seq1  GTTCATTGTCTTGTTCATCAATTTTAAACCAAGTCTCAATTTATAGGGAG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATTGTCTTGTTCATCAATTTTAAACCAAGTCTCAATTTATAGGGAG  389

seq1  AGGTTAAAGGACTGGATTCAAACTCCAGAACACCAGACTGAAGAGCAGAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAAAGGACTGGATTCAAACTCCAGAACACCAGACTGAAGAGCAGAG  439

seq1  GTCAAAAGGAGAAAGTTCAGCCATTGACTCTGTGTGGTCCAGAAAGGATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAGGAGAAAGTTCAGCCATTGACTCTGTGTGGTCCAGAAAGGATT  489

seq1  TCAAAATAAAAGGTTGTAGAGGTCTGCTTTGTGCTCAGAAAATGTTGCCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAATAAAAGGTTGTAGAGGTCTGCTTTGTGCTCAGAAAATGTTGCCC  539

seq1  ATTGTAACTGATAATCACTGTGGGAGCTCCTACCCCCATCAAATCCTTAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAACTGATAATCACTGTGGGAGCTCCTACCCCCATCAAATCCTTAC  589

seq1  TGTGATAATAAATATACAGGCTTCAATCCGTATCTCATTTCATCATACAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATAATAAATATACAGGCTTCAATCCGTATCTCATTTCATCATACAT  639

seq1  ACATAGCATCAGACCTAAACTCACATCTTCCCCCCACTTTATTTCATATG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCATCAGACCTAAACTCACATCTTCCCCCCACTTTATTTCATATG  689

seq1  AAGGAAACTGGAATCCTTGAGACAAGTAATTTCCCAAATAACTCACCTGA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAACTGGAATCCTTGAGACAAGTAATTTCCCAAATAACTCACCTGA  739

seq1  ATTCAAACTCAAGATACCGGGTCTAGAAACTCAAGTCTAACATCTTCCAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAACTCAAGATACCGGGTCTAGAAACTCAAGTCTAACATCTTCCAA  789

seq1  GTAAATATTCACACTGAGACAGACCTCATTGGCAAGTCTCCCTATCACTT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATATTCACACTGAGACAGACCTCATTGGCAAGTCTCCCTATCACTT  839

seq1  GGCCAGGGCTGCTTGAACAGGAAACCATACAGCAAGTGGTTTAAAATACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGGCTGCTTGAACAGGAAACCATACAGCAAGTGGTTTAAAATACT  889

seq1  GGAACATGTTGTATCAAAGGCCCGGATGCTATTAGTCTAAACCCTTGTGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATGTTGTATCAAAGGCCCGGATGCTATTAGTCTAAACCCTTGTGA  939

seq1  GTTTCTTTAGAGGACTGTTCAAAAAATCCTGTTCTTGCCTTTTTCATGTC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTAGAGGACTGTTCAAAAAATCCTGTTCTTGCCTTTTTCATGTC  989

seq1  TTCTGGTTGTCTGGATCATCTTTGGCATTCCTTAACCAGTAAACTTTGCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTTGTCTGGATCATCTTTGGCATTCCTTAACCAGTAAACTTTGCT  1039

seq1  TAACATTTACATGGGATTCTCTCTTGTTCATGTCCAAATTCCATCCAATT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTACATGGGATTCTCTCTTGTTCATGTCCAAATTCCATCCAATT  1089

seq1  AGTGAAGAGGCCAGGAATTC  1117
      ||||||||||||||||||||
seq2  AGTGAAGAGGCCAGGAATTC  1109