BAC Information

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BAC

Clone NameB6Ng01-335N02
Chromosome7 (Build37)
Map Location 50,924,297 - 51,056,903
singlet/doubletdoublet
Overlap geneAtpbd3, Klk14, Klk13, Klk12, Klk11, Klk10, Klk9, Klk8
Upstream geneEG434179, EG546965, LOC546964, LOC100039706, EG637572, LOC100039507, EG435975, LOC668606, EG668668, LOC100039543, LOC668612, LOC385199, LOC100039589, EG668620, Zfp715, Siglecf, Siglecg, LOC100039610, Lim2, Nkg7, Cldnd2, Etfb, 2210412E05Rik, A230106M20Rik, 4931406B18Rik, LOC668630, LOC100039946, Cd33, BC043301, Zfp719, 4933405K07Rik, Ceacam18, Siglece
Downstream geneKlk7, Klk6, Klk5, Klk4, Klk2-ps, Klk15, Klk1b7-ps, Klk1b8, Klk1b1, Klk1b9, Klk1b10-ps, Klk1b11, LOC100039713, Klk1b26, Klk1b18-ps, Klk1b27, Klk1b14-ps, Klk1b15-ps, Klk1b21, Klk1b22, Klk1b16, Klk1b24, Klk1b3, Klk1b4, Klk1b5, Klk1, 1700028J19Rik, LOC668661, Acpt, LOC628854, EG638453, Clec11a, Shank1, 1700008O03Rik, Syt3, Lrrc4b, 0610012D14Rik, Josd2, 2310044H10Rik, 1700021P22Rik, Mybpc2, Spib, Pold1, Nr1h2, Napsa, Kcnc3, Myh14, 1700023D19Rik, Zfp473, Vrk3, EG628904
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-335N02.bB6Ng01-335N02.g
ACCGA120925GA120926
length9951,203
definitionB6Ng01-335N02.b B6Ng01-335N02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,056,326 - 51,056,903)(50,924,297 - 50,925,487)
sequence
gaattcaagtcctcgtcatactaggcaggcactgtatcactgagctacat
ccaaatcctctttttcattcattcattaatttttgtttcttttagggtgt
tctcatatagctaaggttagcttctaactctgcagagctgagtgttcttc
tgatcctccagcttccactactcaagtgttggggtcataactgtgcatgt
cacattatatatactattgatttttgagacatgactctcattaaactgct
tagactaaccttgaccttgagatccttctgcctcagcctcctgggtatct
gggatgaaagcctgagccagctctggggattgtgtatttgtttattgtct
atttcccccaagtggggcaagcaccagaagaacttcacatttgctcatga
ctttatgcctgcccccatgctggccacagtatcttggtcatactgggtgc
ttaataaatgttaatgactggctgtgggtatggctcaaggtagagccctt
gcctagaatcccccaagaaggcctaggggcgtggctcagtgatagagcac
ctgccaaacatgagtgaggccctcagctcaatatctaatactgacaaaaa
aattaaagactgaaattacaattaacattgctattaatcccctttacgga
gaagacccagaatcttcctgctcccagtctcatgggaccctcacaaacgc
tctttgaagaggtcagggtgcactcattcattttatcattcattcatcca
tgcagggtaatttacaaaacattttccaggatcccagggaactttccaag
cacacagagcacatcctcaagagaacagatagaagtggtggcagacatct
ttaaccctgacacttgcgggggcagaggcaggtggatccctgggagttca
aaaccagacttgtctacattgttccaggacaggtacccacatggtgagtt
aaaaccatctataacaccagttttagaacttctggcctcttcagg
gaattcttggctctcttatggagagtggcctgtgtgggtgagtgcttgag
gtcagccatcccgccccagcaaaggttgccctctcaagtgtcacgtcctg
aaagagcccagaacaaaactgagggtgcagtgaagccagtgtggccttgt
tgattcacatctcttaagacacaaataagctctgatgcttagcaaaagat
gagcaaagccgcagcccacggggaccgtgactaatacagaaaggtaagac
ctctgtggccctgtgaatgaaaacggcctcataggctcatagggactggc
actactgggaggtgtggtcttgtcggagtaaatgtgtcactggggaaagg
tgacagaaaccctaagacaacgtaaaaagaaggaaattgcctcaattgag
aaattgcctcaatcccattggcctatgtgagatcttattgattgctgact
gatatgggaggacccagcacactgtagatggcaccactcctgggaaggtg
gacctcccatggcaccactcctgggaaggtggacctcccatggcaccact
cctgggaaggtggtcctcctagtattatgaaagcagttaaatgtgagcca
ggaagtaagtaagtagagttcctccaaggtttctgcttcaagctcctgac
ttgagctcctcccatggcttcccttaacgatggactgtgctctctaagct
aaaataaatgcaaattagttccggtcagtgttttatcacagcagcaggga
agcaaattaggacacgaagccataaactcaaccagaaaggtggggcctgg
actccttttctttctctcctcactcaagaactcagaacaactgagactta
agttcgccaactcatgagctctcctaggaatccctagtcctctggacctc
ttagtgtgctcccccctgagccccagacctggaagtttctccattttaca
caacaacaccgaccccagaaaactgcctgcccaggacttggtcacacatt
ttcttttagggctgtggaagggaccaccagatgtcttgcgttggtccttg
atcctctccagggtgtgaagctctttctcccttcttcccttacttagctg
ggaatcattgttcctgggatatgctgatgataagaggggcttggtcacta
aggacaccgtaacgagttagaatggtccagaacaatggggcctcgctcta
agc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_51056326_51056903
seq2: B6Ng01-335N02.b_45_622 (reverse)

seq1  AGCTGAGGGCCTCACTCATGTTTGGCAGGTGCTCTATCACTGAGCCACGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGAGGGCCTCACTCATGTTTGGCAGGTGCTCTATCACTGAGCCACGC  50

seq1  CCCTAGGCCTTCTTGGGGGATTCTAGGCAAGGGCTCTACCTTGAGCCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGGCCTTCTTGGGGGATTCTAGGCAAGGGCTCTACCTTGAGCCATA  100

seq1  CCCACAGCCAGTCATTAACATTTATTAAGCACCCAGTATGACCAAGATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAGCCAGTCATTAACATTTATTAAGCACCCAGTATGACCAAGATAC  150

seq1  TGTGGCCAGCATGGGGGCAGGCATAAAGTCATGAGCAAATGTGAAGTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCCAGCATGGGGGCAGGCATAAAGTCATGAGCAAATGTGAAGTTCT  200

seq1  TCTGGTGCTTGCCCCACTTGGGGGAAATAGACAATAAACAAATACACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGCTTGCCCCACTTGGGGGAAATAGACAATAAACAAATACACAAT  250

seq1  CCCCAGAGCTGGCTCAGGCTTTCATCCCAGATACCCAGGAGGCTGAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAGCTGGCTCAGGCTTTCATCCCAGATACCCAGGAGGCTGAGGCA  300

seq1  GAAGGATCTCAAGGTCAAGGTTAGTCTAAGCAGTTTAATGAGAGTCATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGATCTCAAGGTCAAGGTTAGTCTAAGCAGTTTAATGAGAGTCATGT  350

seq1  CTCAAAAATCAATAGTATATATAATGTGACATGCACAGTTATGACCCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAATCAATAGTATATATAATGTGACATGCACAGTTATGACCCCAA  400

seq1  CACTTGAGTAGTGGAAGCTGGAGGATCAGAAGAACACTCAGCTCTGCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGAGTAGTGGAAGCTGGAGGATCAGAAGAACACTCAGCTCTGCAGA  450

seq1  GTTAGAAGCTAACCTTAGCTATATGAGAACACCCTAAAAGAAACAAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAAGCTAACCTTAGCTATATGAGAACACCCTAAAAGAAACAAAAAT  500

seq1  TAATGAATGAATGAAAAAGAGGATTTGGATGTAGCTCAGTGATACAGTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAATGAATGAAAAAGAGGATTTGGATGTAGCTCAGTGATACAGTGC  550

seq1  CTGCCTAGTATGACGAGGACTTGAATTC  578
      ||||||||||||||||||||||||||||
seq2  CTGCCTAGTATGACGAGGACTTGAATTC  578

seq1: chr7_50924297_50925487
seq2: B6Ng01-335N02.g_67_1269

seq1  GAATTCTTGGCTCTCTTATGGAGAGTGGCCTGTGTGGGTGAGTGCTTGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTGGCTCTCTTATGGAGAGTGGCCTGTGTGGGTGAGTGCTTGAG  50

seq1  GTCAGCCATCCCGCCCCAGCAAAGGTTGCCCTCTCAAGTGTCACGTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCCATCCCGCCCCAGCAAAGGTTGCCCTCTCAAGTGTCACGTCCTG  100

seq1  AAAGAGCCCAGAACAAAACTGAGGGTGCAGTGAAGCCAGTGTGGCCTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCCCAGAACAAAACTGAGGGTGCAGTGAAGCCAGTGTGGCCTTGT  150

seq1  TGATTCACATCTCTTAAGACACAAATAAGCTCTGATGCTTAGCAAAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCACATCTCTTAAGACACAAATAAGCTCTGATGCTTAGCAAAAGAT  200

seq1  GAGCAAAGCCGCAGCCCACGGGGACCGTGACTAATACAGAAAGGTAAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAAAGCCGCAGCCCACGGGGACCGTGACTAATACAGAAAGGTAAGAC  250

seq1  CTCTGTGGCCCTGTGAATGAAAACGGCCTCATAGGCTCATAGGGACTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGGCCCTGTGAATGAAAACGGCCTCATAGGCTCATAGGGACTGGC  300

seq1  ACTACTGGGAGGTGTGGTCTTGTCGGAGTAAATGTGTCACTGGGGAAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTGGGAGGTGTGGTCTTGTCGGAGTAAATGTGTCACTGGGGAAAGG  350

seq1  TGACAGAAACCCTAAGACAACGTAAAAAGAAGGAAATTGCCTCAATTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGAAACCCTAAGACAACGTAAAAAGAAGGAAATTGCCTCAATTGAG  400

seq1  AAATTGCCTCAATCCCATTGGCCTATGTGAGATCTTATTGATTGCTGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCCTCAATCCCATTGGCCTATGTGAGATCTTATTGATTGCTGACT  450

seq1  GATATGGGAGGACCCAGCACACTGTAGATGGCACCACTCCTGGGAAGGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATGGGAGGACCCAGCACACTGTAGATGGCACCACTCCTGGGAAGGTG  500

seq1  GACCTCCCATGGCACCACTCCTGGGAAGGTGGACCTCCCATGGCACCACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTCCCATGGCACCACTCCTGGGAAGGTGGACCTCCCATGGCACCACT  550

seq1  CCTGGGAAGGTGGTCCTCCTAGTATTATGAAAGCAGTTAAATGTGAGCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAAGGTGGTCCTCCTAGTATTATGAAAGCAGTTAAATGTGAGCCA  600

seq1  GGAAGTAAGTAAGTAGAGTTCCTCCAAGGTTTCTGCTTCAAGCTCCTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTAAGTAAGTAGAGTTCCTCCAAGGTTTCTGCTTCAAGCTCCTGAC  650

seq1  TTGAGCTCCTCCCATGGCTTCCCTTAACGATGGACTGTGCTCTCTAAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGCTCCTCCCATGGCTTCCCTTAACGATGGACTGTGCTCTCTAAGCT  700

seq1  AAAATAAATGCAAATTAGTTCCGGTCAGTGTTTTATCACAGCAGCAGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATGCAAATTAGTTCCGGTCAGTGTTTTATCACAGCAGCAGGGA  750

seq1  AGCAAATTAGGACACGAAGCCATAAACTCAACCAGAAAGGTGGGGCCTGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAATTAGGACACGAAGCCATAAACTCAACCAGAAAGGTGGGGCCTGG  800

seq1  ACTCC-TTTCTTTCTCTCCTCACTCAAGAACTCAGAACAACTGAGACTTA  849
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTTTTCTTTCTCTCCTCACTCAAGAACTCAGAACAACTGAGACTTA  850

seq1  AGTTCGCCAACTCATGAGCTCTCCTAGGAATCCCTAGTCCTCTGGACCTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGCCAACTCATGAGCTCTCCTAGGAATCCCTAGTCCTCTGGACCTC  900

seq1  TTAGTGTGCTCCCCCCTGAGCCCCAGACCTGGAAGTTTCTCCATTTTACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTGTGCTCCCCCCTGAGCCCCAGACCTGGAAGTTTCTCCATTTTACA  950

seq1  CAACAACACCGACCCCAGAAAACTGCCTGCCCAGGACTTGGTCACACATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACACCGACCCCAGAAAACTGCCTGCCCAGGACTTGGTCACACATT  1000

seq1  T--CTTTAGGGCTGTGGAGGGGACCAACCAGATGTC-TGCGTTGGTCCTT  1046
      |   |||||||||||||| |||||| |||||||||| |||||||||||||
seq2  TTCTTTTAGGGCTGTGGAAGGGACC-ACCAGATGTCTTGCGTTGGTCCTT  1049

seq1  GATTCTCTGCAGTGTGGTGAAG-TCTTTCT-CCTTCTTCCCTTACTTAGC  1094
      ||| |||| ||| || |||||| ||||||| |||||||||||||||||||
seq2  GATCCTCTCCAGGGT-GTGAAGCTCTTTCTCCCTTCTTCCCTTACTTAGC  1098

seq1  T-GGAATCAATTTGTCTGGG--ATGCTGATG--AAGAGGGGCTTGG-CAC  1138
      | ||||||| | |  |||||  |||||||||  ||||||||||||| |||
seq2  TGGGAATCATTGTTCCTGGGATATGCTGATGATAAGAGGGGCTTGGTCAC  1148

seq1  ATAAGGACCACAGGACAGAG-TAGACAGG-CCAGACAAGTGGG--CTCGC  1184
       |||||| ||| | |  ||| ||||  || |||||  | ||||  |||||
seq2  -TAAGGA-CACCGTAACGAGTTAGAATGGTCCAGAACAATGGGGCCTCGC  1196

seq1  TCTAAGC  1191
      |||||||
seq2  TCTAAGC  1203