BAC Information

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BAC

Clone NameB6Ng01-337O06
Chromosome7 (Build37)
Map Location 20,856,659 - 20,857,300
singlet/doubletsinglet
Overlap geneEG545926
Upstream geneVasp, C79127, Rtn2, Fosb, D830036C21Rik, Ercc1, Cd3eap, Ppp1r13l, Ercc2, Klc3, Ckm, Mark4, 4933417E01Rik, Bloc1s3, Trappc6a, Nkpd1, BC024868, Gemin7, Zfp296, Sfrs16, Relb, Clptm1, Apoc2, Apoc4, Apoc1, Apoe, Tomm40, Pvrl2, Bcam, Cblc, Bcl3, Ceacam16, Ceacam19, Pvr, 2210010C17Rik, EG243872, Ceacam20, Nlrp9b, EG667040, EG667067, LOC620401, V1rd21, EG620537, LOC100043519, EG620574, LOC100043523
Downstream geneLOC100043528, LOC100042964, LOC100042966, LOC100043533, EG435949, LOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-337O06.bB6Ng01-337O06.g
ACCGA122367GA122368
length1,183965
definitionB6Ng01-337O06.b B6Ng01-337O06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatcttttaagggggctatttgatt
ttctggagtccaccctcttgagttctttatatatattggacattagtccc
ctatctgatttaagataggtaaagatcctttaccaatctgttggtggtct
tttagtcttattgacggtgtcttttgcctttgcagaagctttgcagtttc
atgaggtcctatttgtcaatccttgatcttaaagcacaagccattgctgt
tctattcaggaattttttccctgtgcccatattttcaaggctttgcccca
ctttctcctctatacatttcagtgtttctggttttacgtgaagttccttg
atccacttagatttgaccttagtacaattagagaggaatgggttgattcg
cattgttctacatgataacaaccagttgtgctagcaccatttgttgaaaa
tgctgtcttttttccactggatggttttagctcccttgtcgaagttcaag
tgaccataggtgtgtgggttcatttctgggtcttcaattctattccattg
gtctacttctatgtcactataccagtaccatgcagtttttatcacaattg
ctctgtagtacagctttaggttaggcatgctgattccaccagaggtactt
ttatccttgagaagagcttttgctatcctaggttttttgttattccagat
gaatttgcagattgctctttctaattcgttgaagaattgagttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagggacttgaagtttttatcat
acagatctttcactttccttagttagagtcatgccaagatattttatatt
attgtgactattggagaagggtgttgttcctaattctttctcagcctgtt
tattctttgtatagagaatgccattgacttgtttgagtaattttatatcc
agctacttcaccggaagcttgttatcagtttaggtaggtctctgggtgca
ctttaggtcaccttatatataccattcattcatctgcaaaggtgaatatt
ggacgtccctcttttccaaatatgggatatact
gaattcagagtctgcagagatcagtaaagagtggttgatcccctgggatt
agggatacatatagttgtgagctgccatatgagtgctaggaatcgaatct
tgtttctctcctagaacagcaagcgctcttaactatggagacatgtctcc
tggatttttaattttgtctatttatttatttatttatttatttatttatt
tatttatttatttattcactttatatcccaattgaagctccccatccaac
tgcccccctctcctcccagtctcctatactcctctctttcacctctgaaa
aaatggaaacccctcctgggtaccaacccacccaggcacctcaagttact
gtagcactaggcacatcctctcccactgaggccagacaaagcagaccagt
tagagtaacaggatccacaggcaggcagcagagtcagactaagcccccat
aagacaaagctgcacatctgctacatatgtgtaggggtctaggtccagcc
cttgtatgctctttggttgatggctcgtttcttggaactcccaagggtat
aggatagttgactctaatggtcttctggggagtccctgccccctccaggt
tccccaatccttcccccaactcttccagaagacttcctgggcttggcctc
atgtttggctatgggtctctacgtctgtttcagtcagctgctgggtggag
cccctcagaggacaattattctagggttgtgactgtgaatccatgctgac
agatacaaacaacctaaggctccaagataagaaggcaggcccacaatgtg
ccccactgatcctctgaggacagctcagcacaccgccccaccctaaactg
caggggttgcttctgcattcatttatgtcagtctcacacagggtacctat
ttatccagggcccgcaatgacaaatatagctgtcaacagtgtcttcacat
gttctatcattgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_20856659_20857300
seq2: B6Ng01-337O06.g_64_733 (reverse)

seq1  AAAGACCCGTAGCCAAACATGAGAGCAAGCCCAGGAAGTCTTCTGGAAGA  50
      | |||||| ||||||||||||||  |||||||||||||||||||||||||
seq2  AGAGACCCATAGCCAAACATGAGGCCAAGCCCAGGAAGTCTTCTGGAAGA  50

seq1  GTTGGGGGAAGGATTGGGGAACCTGGAGGGGGCAGGGACTCCACAGAAGA  100
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTTGGGGGAAGGATTGGGGAACCTGGAGGGGGCAGGGACTCCCCAGAAGA  100

seq1  CCATCAGAGTCAACTATCCTATACCCTTGGGAGTTCCAAGAAAAGAGCCA  150
      |||| |||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCATTAGAGTCAACTATCCTATACCCTTGGGAGTTCCAAGAAACGAGCCA  150

seq1  TCAACCAAAGAGCATACAAGGGCTGGACCTAGACCCCGACACATATGTAG  200
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCAACCAAAGAGCATACAAGGGCTGGACCTAGACCCCTACACATATGTAG  200

seq1  CAGATGTGCAGCTTTGTCTTATGGGGGCTTAGTCTGACTCTGCTGCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGTGCAGCTTTGTCTTATGGGGGCTTAGTCTGACTCTGCTGCCTGC  250

seq1  CTGTGGATCCTGTTACTCTAACTGGTCTGCTTTGTCTGGCCTCAGTGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGATCCTGTTACTCTAACTGGTCTGCTTTGTCTGGCCTCAGTGGGA  300

seq1  GAGGATGTGCCTAGTGCTACAAAAACTTGAGGTGCCTGGGTGGGTTGGTA  350
      |||||||||||||||||||||  |||||||||||||||||||||||||||
seq2  GAGGATGTGCCTAGTGCTACAGTAACTTGAGGTGCCTGGGTGGGTTGGTA  350

seq1  CCCAGGAGGGGCTTCCATTTTTTCAGAGGTGAAAGAGAGGAGTATAGGAG  400
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGAGGGGTTTCCATTTTTTCAGAGGTGAAAGAGAGGAGTATAGGAG  400

seq1  ACTGGGAGGAGAGGGGGGCAGTTGGATGTGGGGCTTCAATTGGGATATAA  450
      |||||||||||||||||||||||||||| || ||||||||||||||||||
seq2  ACTGGGAGGAGAGGGGGGCAGTTGGATGGGGAGCTTCAATTGGGATATAA  450

seq1  AGTG----------------------------AATAAATAAATAAATAAA  472
      ||||                            ||||||||||||||||||
seq2  AGTGAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA  500

seq1  TAGACAAAATTAAAAATCCAGGAGACATGTCTCCATAGTTGAGAGTGCTT  522
      |||||||||||||||||||||||||||||||||||||||| |||| ||||
seq2  TAGACAAAATTAAAAATCCAGGAGACATGTCTCCATAGTTAAGAGCGCTT  550

seq1  GCTGTTCTAGGAGAGAAACAAGATTCGATTCCTAGCACTCATATGGCAGC  572
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTCTAGGAGAGAAACAAGATTCGATTCCTAGCACTCATATGGCAGC  600

seq1  TCACAACTATATGTATCCCTAATCCCAGGGGATCAACCACTCTTTACTGA  622
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACTATATGTATCCCTAATCCCAGGGGATCAACCACTCTTTACTGA  650

seq1  TCTCTGCAGACTCTGAATTC  642
      ||||||||||||||||||||
seq2  TCTCTGCAGACTCTGAATTC  670