BAC Information

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BAC

Clone NameB6Ng01-342C16
Chromosome7 (Build37)
Map Location 70,200,469 - 70,348,136
singlet/doubletdoublet
Overlap geneChrna7
Upstream geneNdn, Magel2, Mkrn3, Peg12, Atp5l-ps1, EG665038, LOC669222, LOC384631, LOC622243, EG622251
Downstream geneOtud7a, LOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik, Trpm1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342C16.bB6Ng01-342C16.g
ACCGA125328GA125329
length718743
definitionB6Ng01-342C16.b B6Ng01-342C16.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,200,469 - 70,201,186)(70,347,535 - 70,348,136)
sequence
gaattcctacaagtgcttcagggattgcatctcatacaaacacatgaaaa
ttgcccatcaagaagaattttttcttaactcttctcatattccctttcag
aaagaggaaggcacattggaagaaatcattagcaaaagcaagatagaaca
cacagccaacagcacccttggagcacctgctcactgaacaagaaggatgt
tttaggcgagcagccgggccatcctgttggcacctttgaaactctctgcc
tcttgggagcaaggaaagggttccaggtcagttcgtgtactgcagacaga
tttgagcctctaaaaatttgtatcttagtctgtatgctaacttctctgct
ccagcagtcaacagatatccatcagcattctacagcatgcacttggggga
taggctaaagactcagagcattgggttttacagacaaataagtctatgtt
agattctgaacatgcctgcttgagttcagaattttacaatactttgcctg
cttttgctgttgttgctttttctctctttctctctttctttctttctttc
tttctttctttctttctttcttcctttcttccttccttcctctctctctc
tctccctctctctctctctctttctctctctttctttctttctttctttc
tttcttcctttcttccttccttcctctctctctctctctctctctctctc
tctctctctctctctctc
gaattctatagagattgattgtatccagctgatgggtgatctcaaatcca
actatgcccttgactgattttctgcctgcagcacagatgcttttatttcc
ttttgggatatatatatatatatatatatatatatatatatatatatata
cacacacacacacatatatacatatgaagagagagaaagagagagagaga
gagagagagagagagagagagagagagaagagaagagacgagacgagacg
agatgagacgagacgagacgagacatagtcttgctgtgtagcccagactg
gcctcagtgctaacattgcaagtgtgtatggcagtgtgagaaacacatct
gtgtgttttctaacaaaggccttcagctgtcagggtggattgtgaggtac
acatcaaggattgtgtgtcttcttgaaacactggctcccttctctttatg
caactgtagcctctacccttgacaacacggcttgctttgagttcttgtgt
tcctatgcttaataatgtttcttacagacaatacggagttggatttctct
ttttcatctactttatttagtgtagttggtgcatttagacagtcaaacca
aaagtgattccttacatcttttggatttaatgtatacattttaattttct
gtttattcacatgctattctttctagctttacctaacaacattatttctt
ctgatatttttttctatggatgcggtctgccattttatacact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70200469_70201186
seq2: B6Ng01-342C16.b_46_763

seq1  GAATTCCTACAAGTGCTTCAGGGATTGCATCTCATACAAACACATGAAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACAAGTGCTTCAGGGATTGCATCTCATACAAACACATGAAAA  50

seq1  TTGCCCATCAAGAAGAATTTTTTCTTAACTCTTCTCATATTCCCTTTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCATCAAGAAGAATTTTTTCTTAACTCTTCTCATATTCCCTTTCAG  100

seq1  AAAGAGGAAGGCACATTGGAAGAAATCATTAGCAAAAGCAAGATAGAACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGGAAGGCACATTGGAAGAAATCATTAGCAAAAGCAAGATAGAACA  150

seq1  CACAGCCAACAGCACCCTTGGAGCACCTGCTCACTGAACAAGAAGGATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCCAACAGCACCCTTGGAGCACCTGCTCACTGAACAAGAAGGATGT  200

seq1  TTTAGGCGAGCAGCCGGGCCATCCTGTTGGCACCTTTGAAACTCTCTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGCGAGCAGCCGGGCCATCCTGTTGGCACCTTTGAAACTCTCTGCC  250

seq1  TCTTGGGAGCAAGGAAAGGGTTCCAGGTCAGTTCGTGTACTGCAGACAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGGAGCAAGGAAAGGGTTCCAGGTCAGTTCGTGTACTGCAGACAGA  300

seq1  TTTGAGCCTCTAAAAATTTGTATCTTAGTCTGTATGCTAACTTCTCTGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCCTCTAAAAATTTGTATCTTAGTCTGTATGCTAACTTCTCTGCT  350

seq1  CCAGCAGTCAACAGATATCCATCAGCATTCTACAGCATGCACTTGGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGTCAACAGATATCCATCAGCATTCTACAGCATGCACTTGGGGGA  400

seq1  TAGGCTAAAGACTCAGAGCATTGGGTTTTACAGACAAATAAGTCTATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTAAAGACTCAGAGCATTGGGTTTTACAGACAAATAAGTCTATGTT  450

seq1  AGATTCTGAACATGCCTGCTTGAGTTCAGAATTTTACAATACTTTGCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCTGAACATGCCTGCTTGAGTTCAGAATTTTACAATACTTTGCCTG  500

seq1  CTTTTGCTGTTGTTGCTTTTTCTCTCTTTCTCTCTTTCTTTCTTTCTTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGCTGTTGTTGCTTTTTCTCTCTTTCTCTCTTTCTTTCTTTCTTTC  550

seq1  TTTCTTTCTTTCTTTCTTTCTTCCTTTCTTCCTTCCTTCCTCTCTCTCTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTCCTTTCTTCCTTCCTTCCTCTCTCTCTC  600

seq1  TCTCCCTCTCTCTCTCTCTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCTCTCTCTCTCTCTCTTTCTCTCTCTTTCTTTCTTTCTTTCTTTC  650

seq1  TTTCTTCCTTTCTTCCTTCCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCTTTCTTCCTTCCTTCCTCTCTCTCTCTCTCTCTCTCTCTCTC  700

seq1  TCTCTCTCTCTCTCTCTC  718
      ||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTC  718

seq1: chr7_70347535_70348136
seq2: B6Ng01-342C16.g_67_668 (reverse)

seq1  TTTGGTTTGACTGTCTAAATGCACCAACTACACTAAATAAAGTAGATGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTGACTGTCTAAATGCACCAACTACACTAAATAAAGTAGATGAA  50

seq1  AAAGAGAAATCCAACTCCGTATTGTCTGTAAGAAACATTATTAAGCATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGAAATCCAACTCCGTATTGTCTGTAAGAAACATTATTAAGCATAG  100

seq1  GAACACAAGAACTCAAAGCAAGCCGTGTTGTCAAGGGTAGAGGCTACAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACACAAGAACTCAAAGCAAGCCGTGTTGTCAAGGGTAGAGGCTACAGT  150

seq1  TGCATAAAGAGAAGGGAGCCAGTGTTTCAAGAAGACACACAATCCTTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATAAAGAGAAGGGAGCCAGTGTTTCAAGAAGACACACAATCCTTGAT  200

seq1  GTGTACCTCACAATCCACCCTGACAGCTGAAGGCCTTTGTTAGAAAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACCTCACAATCCACCCTGACAGCTGAAGGCCTTTGTTAGAAAACAC  250

seq1  ACAGATGTGTTTCTCACACTGCCATACACACTTGCAATGTTAGCACTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATGTGTTTCTCACACTGCCATACACACTTGCAATGTTAGCACTGAG  300

seq1  GCCAGTCTGGGCTACACAGCAAGACTATGTCTCGTCTCGTCTCGTCTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTCTGGGCTACACAGCAAGACTATGTCTCGTCTCGTCTCGTCTCAT  350

seq1  CTCGTCTCGTCTCGTCTCTTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTCTCGTCTCGTCTCTTCTCTTCTCTCTCTCTCTCTCTCTCTCTCTC  400

seq1  TCTCTCTCTCTCTCTTTCTCTCTCTTCATATGTATATATGTGTGTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTTTCTCTCTCTTCATATGTATATATGTGTGTGTGTG  450

seq1  TGTATATATATATATATATATATATATATATATATATATATATATCCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATATATATATATATATATATATATATATATATATATATATCCCAA  500

seq1  AAGGAAATAAAAGCATCTGTGCTGCAGGCAGAAAATCAGTCAAGGGCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATAAAAGCATCTGTGCTGCAGGCAGAAAATCAGTCAAGGGCATA  550

seq1  GTTGGATTTGAGATCACCCATCAGCTGGATACAATCAATCTCTATAGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGATTTGAGATCACCCATCAGCTGGATACAATCAATCTCTATAGAAT  600

seq1  TC  602
      ||
seq2  TC  602