BAC Information

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BAC

Clone NameB6Ng01-342L07
Chromosome7 (Build37)
Map Location 9,060,177 - 9,061,312
singlet/doubletsinglet
Overlap geneEG434109
Upstream geneLOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128
Downstream geneLOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-342L07.bB6Ng01-342L07.g
ACCGA125702GA125703
length1,1341,185
definitionB6Ng01-342L07.b B6Ng01-342L07.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttttgcagtttgacattaatagtttataggtgcttcttcttat
gtttgctcacatgcaaatgtggaataaataatttatatcagtagttccag
atgttctgattgtcaaattgacagttagaattatattttcaaaataaaat
agtcttagtactaaactgggaataactgtcactcaattgtctatcactaa
ctcatgcttcattcactactattcgtatgaggtatgaaatagtatttcgt
ggtcttttcacctagctcaatttcatatgtctaggtaccagaatgtgtta
tgaaaattttgttctattatgatggattagatttgtttaaacttgtttta
ttttattattctctcatagaatcctgtcattttctaatgagtgacataaa
gaggatctgataaaaaggaaaggaaataggcatattaactatgatatatt
tgccagtagaactgacaattgttcatatcccaatagaaggaatggaaact
gtaattaggatatattacgtgagaattacaagttattttcaataaataaa
acaattaaaaatttaaaaaaatctccctgttctcagagaatgatctttct
gttgtgtgttgtgttcttttggtaggtgtttttgtaaagaattattccac
acatatccatcaaatatattgttcttgaattacctttttcccttttatta
aacattatactgttttcctccattttttaataaagaaaagttctcctctt
gtatatgaatgtgtcttcctaccctctgcaggcaacttaggaatgtctta
aaaaaaacagttttgttgtctttgatttcatttagagaatgttaacaaaa
aagttcaattataactgaaaattatttgatgattttgtctggttgctgtt
attgctgtacttgaggtgtgttaataacctttattttttctgttgtctag
tgctgtctataaggttctttgaccctggtggtcatctaatgtaaaagagt
gaatgggatcttcaaattactaaaaagtcatggtttctatgaatatggat
ttctgcatgggttccactagtgaatgggtgaatgtccttttataaatgaa
acaccttttggataataatgactaagggatagca
gaattcaacgcccatacttaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctacctattcaacattg
tacttgaagtcttagccagagcaatttgacaacaaaaggagatcaagggg
atacaaattggaaaggaataagttaaaatatcactttttgcagatgatgt
gatagtatatataagtgacccaaaaaattccaccagagaactcataagcc
tgataaacagcttcaatgaagtagctggatataaaattaactcaaacaag
tcaatggcatttctgtacacaaagaataatagggctgagaaagaaatgag
ggaaataacacccttctcaatagtcacaaataatataaaacaccttggcg
tgactctaacttaggaagtgaaagatctatatgataagacttttaagtct
ctgaagaaagaaaataaagaagatcttaggagatggaaagatttttcatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacacattcaatgcaatccccatcaaaattccaactcaattcttc
aacgaattagaaagagtaatctgcaatttcatcgggaataacaaaaaaaa
cagaggataataaaaccacttctcaaggaaagaagatcctctggtggaat
caccatgcctgacctaaagctttacaacagagcaattgtgataaatactg
catggtactggtatagggacagacaagtagatcaatggaatagaattgaa
gacccagaaatgaacccacccacgtatgatcacttgatctttgaaagggc
agctaaaagtatccagtggaataaagataacattttcaacaaatggtgct
ggcacaactgggttttatcatgtagaagaacgcaaattgatccatcctat
ctctgtatacgtcaaatctagtgatcaggacttcacataaacagagacac
tgaactatagagagaagtggaaaacctgcaaatgggcgcagagcattctg
attgaaggtatggcctgtgctgtggagtgaatgacatgaacctttaactg
cagcttctgtagtaagaaacaccgctcattagagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9060177_9061312
seq2: B6Ng01-342L07.b_50_1183 (reverse)

seq1  TGCTATCCCTT-GTCATTA-TATCCAAAA-GTGTTTACCATATAATAAAA  47
      ||||||||||| ||||||| ||||||||| ||||||  ||| | ||||||
seq2  TGCTATCCCTTAGTCATTATTATCCAAAAGGTGTTT--CAT-TTATAAAA  47

seq1  GGACATTCAACACATTCACTAGT-GAACACAATTACAGAAAATCATATTC  96
      |||||||| || ||||||||||| |||| ||  | ||||||  |||||||
seq2  GGACATTC-ACCCATTCACTAGTGGAACCCA--TGCAGAAATCCATATTC  94

seq1  ATAGAAA-CATGACTTTTTAGTAAATTTGAAGATTCCATTCACTCTTTTA  145
      ||||||| |||||||||||||| ||||||||||| |||||||||||||||
seq2  ATAGAAACCATGACTTTTTAGT-AATTTGAAGATCCCATTCACTCTTTTA  143

seq1  CATAAGATGACCA-CAAGGTCAAAGGAACCTATAGACAGCACTAGAACAA  194
      ||| ||||||||| || |||||||| | | ||||||||||||||| ||||
seq2  CATTAGATGACCACCAGGGTCAAAGAACCTTATAGACAGCACTAG-ACAA  192

seq1  CAGAAAAAATAAAGGTTATTAACACACCTCAAGTACAGCAATAACAGCAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAAATAAAGGTTATTAACACACCTCAAGTACAGCAATAACAGCAA  242

seq1  CCAGACAAAATCATCAAATAATTTTCAGTTATAATTGAACTTTTTTGTTA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACAAAATCATCAAATAATTTTCAGTTATAATTGAACTTTTTTGTTA  292

seq1  ACATTCTCTAAATGAAATCAAAGACAACAAAACTGTTTTTTTTAAGACAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCTCTAAATGAAATCAAAGACAACAAAACTGTTTTTTTTAAGACAT  342

seq1  TCCTAAGTTGCCTGCAGAGGGTAGGAAGACACATTCATATACAAGAGGAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGTTGCCTGCAGAGGGTAGGAAGACACATTCATATACAAGAGGAG  392

seq1  AACTTTTCTTTATTAAAAAATGGAGGAAAACAGTATAATGTTTAATAAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCTTTATTAAAAAATGGAGGAAAACAGTATAATGTTTAATAAAA  442

seq1  GGGAAAAAGGTAATTCAAGAACAATATATTTGATGGATATGTGTGGAATA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAAGGTAATTCAAGAACAATATATTTGATGGATATGTGTGGAATA  492

seq1  ATTCTTTACAAAAACACCTACCAAAAGAACACAACACACAACAGAAAGAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTACAAAAACACCTACCAAAAGAACACAACACACAACAGAAAGAT  542

seq1  CATTCTCTGAGAACAGGGAGATTTTTTTAAATTTTTAATTGTTTTATTTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTGAGAACAGGGAGATTTTTTTAAATTTTTAATTGTTTTATTTA  592

seq1  TTGAAAATAACTTGTAATTCTCACGTAATATATCCTAATTACAGTTTCCA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATAACTTGTAATTCTCACGTAATATATCCTAATTACAGTTTCCA  642

seq1  TTCCTTCTATTGGGATATGAACAATTGTCAGTTCTACTGGCAAATATATC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCTATTGGGATATGAACAATTGTCAGTTCTACTGGCAAATATATC  692

seq1  ATAGTTAATATGCCTATTTCCTTTCCTTTTTATCAGATCCTCTTTATGTC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTAATATGCCTATTTCCTTTCCTTTTTATCAGATCCTCTTTATGTC  742

seq1  ACTCATTAGAAAATGACAGGATTCTATGAGAGAATAATAAAATAAAACAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTAGAAAATGACAGGATTCTATGAGAGAATAATAAAATAAAACAA  792

seq1  GTTTAAACAAATCTAATCCATCATAATAGAACAAAATTTTCATAACACAT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAAACAAATCTAATCCATCATAATAGAACAAAATTTTCATAACACAT  842

seq1  TCTGGTACCTAGACATATGAAATTGAGCTAGGTGAAAAGACCACGAAATA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTACCTAGACATATGAAATTGAGCTAGGTGAAAAGACCACGAAATA  892

seq1  CTATTTCATACCTCATACGAATAGTAGTGAATGAAGCATGAGTTAGTGAT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTCATACCTCATACGAATAGTAGTGAATGAAGCATGAGTTAGTGAT  942

seq1  AGACAATTGAGTGACAGTTATTCCCAGTTTAGTACTAAGACTATTTTATT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAATTGAGTGACAGTTATTCCCAGTTTAGTACTAAGACTATTTTATT  992

seq1  TTGAAAATATAATTCTAACTGTCAATTTGACAATCAGAACATCTGGAACT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATATAATTCTAACTGTCAATTTGACAATCAGAACATCTGGAACT  1042

seq1  ACTGATATAAATTATTTATTCCACATTTGCATGTGAGCAAACATAAGAAG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATATAAATTATTTATTCCACATTTGCATGTGAGCAAACATAAGAAG  1092

seq1  AAGCACCTATAAACTATTAATGTCAAACTGCAAAAGGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCTATAAACTATTAATGTCAAACTGCAAAAGGAATTC  1134