BAC Information

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BAC

Clone NameB6Ng01-347G06
Chromosome7 (Build37)
Map Location 134,075,763 - 134,076,742
singlet/doubletsinglet
Overlap geneKctd13
Upstream geneGsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik
Downstream geneA830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-347G06.bB6Ng01-347G06.g
ACCGA129005GA129006
length1,069975
definitionB6Ng01-347G06.b B6Ng01-347G06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgagggtgtccatgaccctgaatgtgagttccaggtgctttctg
tcatccggatagaatcctgtctttgagtcctgtgtcccagtaacacaatt
ctctttgtgctaagtcatttgaattgggtttctgaggattttcactgatc
tgttttggaggtttgtgttgtgtttgtgttccaaagaccagctttgacac
caaagggtaaactgaggcaagcagccgctgtggggattggtgttgagagt
ggctgacggggtccatccagatactgatgggtactgctgccaatggcagc
cagcccttagagaagttgctcagcagccttttgctctgagggaacaaagc
ctgatttactggggctggcactccctgtggcaattgaaaactctgaagtc
ttttcattccttgggcccagcaagaaagagaagaaaaaattcacacacac
acacacacacacacacacaatggatgaaacaaaaggcagcattcaataac
ttcatgcacacaaacatatgcatacatgtatatacatacatgcatacatt
catacatatgtgcacacatacatgcatacagacctacagacatatataca
ttcacacatgaattgttagggcaaagcttcagcaaatatgctccaggcat
tcacacacacacacacacacaactggtgggtggagcaagctcctgcacac
actcagacaagcatgacatgtgtacatgcacacagatttgatggatggaa
caaagttccaacacactctcacacaaaccttacacgcatacacacagacg
cataattggtgggtggaaggagcaatgttccaatccccgcacttttagtc
ttttcttccacagtgtgtatcccagcgaaatcttccaagcagtaagaagt
tacaatgtgcttaacattttagttttcttctagagaatggttggtggaaa
aaaacagttgtgttccccatacaagagagagccagtagcaatttacattt
ttaaatttattcccaggaacacgcatacattcattactaagcgactttgt
attagataaacaaagtgtt
gaattcttttggatagtatatgtatatatttcaaattttttacccatagc
ccatggggggaaaattagttttatccttatataattcaaagcattgtgtg
aaagagtgctgttaagaaaatgtcccttaatgtaccattcctttgtctcc
tctatccccctctctaatatttgagacccattaaacttattttatgaccc
attaaagagtcatcatgtagcagttttaaaaatattgaatatctttttta
acatatatttttgggaggaatggcatgtgccacatgtatatgtggaggcc
agaggacaactgtgaagaatagattctcttctcctaccttgtggcacctg
gggaggggagaccagactcaggttgtcaagttttgcctccttttctttct
gagcgctttgtctggccctgagctagaccttggaaggaaggatagtcctg
cttagttactttatgttacagttttgagacagggtctagccatatagccc
aggttagccttgacctcaagctcttcctgtgtcagcctcctggatgctgg
gattacaggtgtgcctgtctagctctgctctgttattgaagttgacctat
tgtccttgcatactgctgagtcaggagggattttgccattgcctagttgg
tacattttgtacccttggttaacatacaaagatacaaagaaacattaggg
atgctttaaaggccagtgatcggtttcagctccagtttatctgactccca
agtgtagtgcttccttcccacccccaccccccagctttttcctgtccccc
tcttgccctttgtccctgcccctgcccccactcctgcagcagctccacag
tcctcagggcatgccaaagcactccagtctaggcaaatcttttctcttta
agttttgtgtccttcttcccttcttcccagcccttgacatctcccctgac
tctacccctgtctaatctaatgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134075763_134076742
seq2: B6Ng01-347G06.g_69_1043

seq1  GAATTCTTTTGGATAGTATATGTATATATTTCAAATTTTTTACCCATAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGGATAGTATATGTATATATTTCAAATTTTTTACCCATAGC  50

seq1  CCATGGGGGGAAAATTAGTTTTATCCTTATATAATTCAAAGCATTGTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGGGGGGAAAATTAGTTTTATCCTTATATAATTCAAAGCATTGTGTG  100

seq1  AAAGAGTGCTGTTAAGAAAATGTCCCTTAATGTACCATTCCTTTGTCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTGCTGTTAAGAAAATGTCCCTTAATGTACCATTCCTTTGTCTCC  150

seq1  TCTATCCCCCTCTCTAATATTTGAGACCCATTAAACTTATTTTATGACCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATCCCCCTCTCTAATATTTGAGACCCATTAAACTTATTTTATGACCC  200

seq1  ATTAAAGAGTCATCATGTAGCAGTTTTAAAAATATTGAATATCTTTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGAGTCATCATGTAGCAGTTTTAAAAATATTGAATATCTTTTTTA  250

seq1  ACATATATTTTTGGGAGGAATGGCATGTGCCACATGTATATGTGGAGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATTTTTGGGAGGAATGGCATGTGCCACATGTATATGTGGAGGCC  300

seq1  AGAGGACAACTGTGAAGAATAGATTCTCTTCTCCTACCTTGTGGCACCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGACAACTGTGAAGAATAGATTCTCTTCTCCTACCTTGTGGCACCTG  350

seq1  GGGAGGGGAGACCAGACTCAGGTTGTCAAGTTTTGCCTCCTTTTCTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGGAGACCAGACTCAGGTTGTCAAGTTTTGCCTCCTTTTCTTTCT  400

seq1  GAGCGCTTTGTCTGGCCCTGAGCTAGACCTTGGAAGGAAGGATAGTCCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGCTTTGTCTGGCCCTGAGCTAGACCTTGGAAGGAAGGATAGTCCTG  450

seq1  CTTAGTTACTTTATGTTACAGTTTTGAGACAGGGTCTAGCCATATAGCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTTACTTTATGTTACAGTTTTGAGACAGGGTCTAGCCATATAGCCC  500

seq1  AGGTTAGCCTTGACCTCAAGCTCTTCCTGTGTCAGCCTCCTGGATGCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAGCCTTGACCTCAAGCTCTTCCTGTGTCAGCCTCCTGGATGCTGG  550

seq1  GATTACAGGTGTGCCTGTCTAGCTCTGCTCTGTTATTGAAGTTGACCTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACAGGTGTGCCTGTCTAGCTCTGCTCTGTTATTGAAGTTGACCTAT  600

seq1  TGTCCTTGCATACTGCTGAGTCAGGAGGGATTTTGCCATTGCCTAGTTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTTGCATACTGCTGAGTCAGGAGGGATTTTGCCATTGCCTAGTTGG  650

seq1  TACATTTTGTACCCTTGGTTAACATACAAAGATACAAAGAAACATTAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTTGTACCCTTGGTTAACATACAAAGATACAAAGAAACATTAGGG  700

seq1  ATGCTTTAAAGGCCAGTGATCGGTTTCAGCTCCAGTTTATCTGACTCCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTTTAAAGGCCAGTGATCGGTTTCAGCTCCAGTTTATCTGACTCCCA  750

seq1  AGTGTAGTGCTTCCTTCCCACCCCCACCCCCCAGCTTTTTCCTGTCCCCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTAGTGCTTCCTTCCCACCCCCACCCCCCAGCTTTTTCCTGTCCCCC  800

seq1  TCTTGCCC-TTGTCCCTGCCCCTGCCCCCACTCCTGCAGCAGCTCCACAG  849
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCCCTTTGTCCCTGCCCCTGCCCCCACTCCTGCAGCAGCTCCACAG  850

seq1  TCCTCAGGGCATGCCAAAGCAACTCCAGTCTAGGCAAATCTTTTCTCTTT  899
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TCCTCAGGGCATGCCAAAGC-ACTCCAGTCTAGGCAAATCTTTTCTCTTT  899

seq1  AAGTTTTGTGTCCCTTCTTCCCCTTCTTCCCAGTCCCTTGACCATCTCCC  949
      ||||||||||| ||||||| ||||||||||||| ||||||| ||||||||
seq2  AAGTTTTGTGT-CCTTCTT-CCCTTCTTCCCAG-CCCTTGA-CATCTCCC  945

seq1  CTGACTCTACCCCTGTCTAATCCTAATGTGT  980
      ||||||||||||||||||||| |||||||||
seq2  CTGACTCTACCCCTGTCTAAT-CTAATGTGT  975