BAC Information

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BAC

Clone NameB6Ng01-349A02
Chromosome7 (Build37)
Map Location 66,940,056 - 67,010,216
singlet/doubletdoublet
Overlap genenone
Upstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1
Downstream geneLOC664788, Snrpn, Snurf, EG664849, LOC100041201, LOC100041211, LOC664896
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349A02.bB6Ng01-349A02.g
ACCGA130121GA130122
length950101
definitionB6Ng01-349A02.b B6Ng01-349A02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(67,006,765 - 67,010,216)(66,940,056 - 66,940,178)
sequence
gaattctgaactctcagaggagtttgattttacctcatgcaaagacccag
aagtaatgatcagagaaggactggagccatgattgaaggctcaaaagttg
ttggcttagatatccttggaggcccaatattgctggtggagttattcaga
gctgcctcctccttcttcgactgcataggcaaggggacctatgattgccc
ttgttattggctttttctgactgcatgcttggagaagagccttcattccc
ttgaaaactatgctcaggacactggtggaggaagttgatggcaaagacct
aagagaaagtgttgagtacctgtattgcagctcacatatcatccttaagt
ccttagagtgagctgaggacccagcaagcacttgagacaaagggcatggc
atgttcacatccaaggcctgagagtaacagcaagtgagatctggaagggc
agtgtgaagaggttggtaagagcaggagtgttgagggtgcctgtgagata
tgacaagcccatagtacatggtaagcccataatccatgtggttttgcatt
ggtcccactgtaatcggggcatgttctttgtgttgtcttcacagggttgc
attccctttccagtatggtccattgaaaacatgcagaggaaatggcccca
cagcattggctgagtgtttatgtcgtccaactgagtctccatcgaactgt
tgtggtgttgctgacttgccctaggtcacctgagttaaatggtaaggaac
atgggaattgctgcatgaattctaggtgcccaggtcttggtggagcaagg
gaacggctgccattgattatgtccaggcccttctgggacatggaagcatg
ccttagggcctctggtttctcccatgtttgggagcttcggcccattgttc
cctggcatggtattgtcagtgtccagcagtccatttgcctctccccaaag

gggaagcaggcttcattttcacagttgaaaggaaaccccctctcggtccc
tctctctgtgttagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67006765_67010216
seq2: B6Ng01-349A02.b_48_997 (reverse)

seq1  CTTTGGGGAGAGAAATGGACTGCTGGACACTGACAATCCACTGCCAGGGA  50
                                                        
seq2  --------------------------------------------------  0

seq1  ACAATGGGCCGAAGCTCCAAACATGGGAGAAACCAGAGGCCCTAGGCATG  100
                                                        
seq2  --------------------------------------------------  0

seq1  CTCCATGTCCCGAAGGGCCTGGACATAATCAATGGCAGCCGTTCCCTGCT  150
                                                        
seq2  --------------------------------------------------  0

seq1  CCACCAAGACCTGGGCACCTAGAATTCATGCAGCAATTCCCATGTTCCTT  200
                                                        
seq2  --------------------------------------------------  0

seq1  ACCATTTAACTCAGGTAACCTAGGGCCAGTCAGCAACACCACAACAGTTC  250
                                                        
seq2  --------------------------------------------------  0

seq1  GATGGAGACTCGGTTGGACGACATAAACTCTCAGCCAATGCTGTGGGGCC  300
                                                        
seq2  --------------------------------------------------  0

seq1  ATTTCCTCTGCATGTTTTCTATGGATCATACTGGAAAGGGAATGCAACCC  350
                                                        
seq2  --------------------------------------------------  0

seq1  TGTGAAGACAACACAGAGAACATGCCCCGATTACAGTGGGACCAATGCAA  400
                                                        
seq2  --------------------------------------------------  0

seq1  AACCACATGGATTATGGGCTTACCATGTACTATGGGCTTGTCATATCTCA  450
                                                        
seq2  --------------------------------------------------  0

seq1  CAGGCACCCTCAACACTCCTGCTCTTACCAACCTCTTCACACTGCTCTTC  500
                                                        
seq2  --------------------------------------------------  0

seq1  CAGATCTCACTTGCTGTTACTCTCAGGCCTTGGATGTGAACATGCCATGC  550
                                                        
seq2  --------------------------------------------------  0

seq1  CCTTTGTCTCAAGTGCTTGCTGGGTCCTGAGCTCACTCTAAGGACTTAAG  600
                                                        
seq2  --------------------------------------------------  0

seq1  GATGATATGTGAGCTGCAATACAGGTACTCAACACTTTCTCTTAGGTCTT  650
                                                        
seq2  --------------------------------------------------  0

seq1  TGCCATCAACTTCCTCCACCAGTGTCCTGAGCATAGTTTTCAAGGGAATG  700
                                                        
seq2  --------------------------------------------------  0

seq1  GAGGCTCTTCTCCAAGCATGCAGTCAGAAAAAGCCAATAACACGGGCAAT  750
                                                        
seq2  --------------------------------------------------  0

seq1  TATAGGTCCCCTTGCCTATGCAGTCGAAGAAGGAGGAGGCAGCTCTGAAT  800
                                                        
seq2  --------------------------------------------------  0

seq1  AACTCCACCAGCAATATTGGGCCTCCAAGGATATCTAAGCCAACAACTTT  850
                                                        
seq2  --------------------------------------------------  0

seq1  TGAGCCTTCAATCATGGCTCCAGTCCTTCTCTGATCATTACTTCTGGGTC  900
                                                        
seq2  --------------------------------------------------  0

seq1  TTTGCATGAGGTAAAATCAAACTCCTCTGAGAGTTCAGAATTCCAGCTCA  950
                                                        
seq2  --------------------------------------------------  0

seq1  TGGGAAGCAGGCTTCATTTTCACAGCTGAAAGGAACCCCCTCTCTCTCCC  1000
                                                        
seq2  --------------------------------------------------  0

seq1  TCTCTCTGTGTTAGTGTGTGTGTGTGTGTGTGTGTGTGTGTCTTTTACCC  1050
                                                        
seq2  --------------------------------------------------  0

seq1  TGAGACATTCCTTGCTGTGGCAGCCAGTCCCTATTTCTGTCCACCTGTCC  1100
                                                        
seq2  --------------------------------------------------  0

seq1  AGTGCTCATTTTGTCTGTTGTGAAGACTTCCACCTCTCTCATGAGATTGC  1150
                                                        
seq2  --------------------------------------------------  0

seq1  TTTTGGCCATCCACCCCTGCTTTGATCTCTTCTGGTGAAAAGTTCTCAGA  1200
                                                        
seq2  --------------------------------------------------  0

seq1  CTATACTGCTCAGCTTCTCACACTAATGAAAATCCCATTGTGCAGAACTA  1250
                                                        
seq2  --------------------------------------------------  0

seq1  TCACAGGCCAGGATCCGACTTGACTCAAGTTATCTTAGTGTGTCAAATGC  1300
                                                        
seq2  --------------------------------------------------  0

seq1  AGTCTGCATCCAAGAACTTATTTTCTCCCTGATGATTCCCATGAGCATGG  1350
                                                        
seq2  --------------------------------------------------  0

seq1  CTCTCAAAATGGATTTGCAAAACACGATGTGCCCTGTTGAAACCTCCTTC  1400
                                                        
seq2  --------------------------------------------------  0

seq1  CTATGCACACTAGCAACTTGTCTTTCCAGAAGAGTTAGGCCAAAACATCG  1450
                                                        
seq2  --------------------------------------------------  0

seq1  AAAAGAAAGGTCCCATGACACCTTGGTCTCTAATTTAGAGGGTCCCTCAC  1500
                                                        
seq2  --------------------------------------------------  0

seq1  CAAGATGGTTCTCCTAAGGCTGTGGGTGCAAGAACTGTTCCTAGACTTTC  1550
                                                        
seq2  --------------------------------------------------  0

seq1  CCTTTGACCTTGCCAAGGAGGCTGACAACAAGGTCCAAATATACCAAGGA  1600
                                                        
seq2  --------------------------------------------------  0

seq1  TATCCCTTCAACAACATCCAAAGCAACAGCACCTACCAAAGAGGAGATTC  1650
                                                        
seq2  --------------------------------------------------  0

seq1  CTACCAAAGTTATTTTAACAAATCTATCGAGACACAGGTCTGCAAGTCTC  1700
                                                        
seq2  --------------------------------------------------  0

seq1  ATGCTGCCAGCGAGTCCATCAAAGTTTCATCCGTCTACAGACACAGGTAA  1750
                                                        
seq2  --------------------------------------------------  0

seq1  GTGTGTAAATGTGGTGCAAACTGACCCGTGAGGTGCCTGCCATCACCTCC  1800
                                                        
seq2  --------------------------------------------------  0

seq1  AAGGCTTTGCTCCTTCTCTATTTCCTAGCCAATCGCCCGGGAAACTTCCA  1850
                                                        
seq2  --------------------------------------------------  0

seq1  AGCTGCCAGGGACACAGAGCCTTCTGTTCACCACCTGAACCGACAACAGT  1900
                                                        
seq2  --------------------------------------------------  0

seq1  CACACAGTCCCGTTTACATGCTACTGGGTCAAGCTACACTCTACCAGCAG  1950
                                                        
seq2  --------------------------------------------------  0

seq1  CCTGCATTCTATTGACTACGTAATGCAATGCAACAGGGTTAAAATTCATA  2000
                                                        
seq2  --------------------------------------------------  0

seq1  TAAGTGCTTCTGAGAAGCCTGTCTCCACTGCTTGATATTCCCATGTGAAT  2050
                                                        
seq2  --------------------------------------------------  0

seq1  AGCCAAGATTTGGTGCCACTGCCACTGCTACTTTTGCCTCACAATCTACT  2100
                                                        
seq2  --------------------------------------------------  0

seq1  TTCCACAATGGCTGGGGCCCTCTCCTTGGACCTAGCACGACTACCTACTG  2150
                                                        
seq2  --------------------------------------------------  0

seq1  AGTATCTGCCAAGCATCTCCACTACAGCAAAGGGAGCAAGCCACCAGTGC  2200
                                                        
seq2  --------------------------------------------------  0

seq1  TTAAGGACCTGCTGTGTCCTACACCATGAATTTTTGGCAGAGTAGGCCAA  2250
                                                        
seq2  --------------------------------------------------  0

seq1  GCACACACCTGTCTCTGGAGAGTCTGGCTAGAGCCCGAAGAAGTCAAGAA  2300
                                                        
seq2  --------------------------------------------------  0

seq1  CAATGGAGTGGTTGGGCAGCCTGTGCCTGACGCCCATAGCACCTGGGAGA  2350
                                                        
seq2  --------------------------------------------------  0

seq1  CCCAAGATGCTGGACCTCAGTTCCGATGAGAGTGGCGGTACAGAGTTTCC  2400
                                                        
seq2  --------------------------------------------------  0

seq1  ACTCATTTTGTTCAGCTTTTCCAAGGAATGTTTGACTGGGAATCATCATA  2450
                                                        
seq2  --------------------------------------------------  0

seq1  GATCCAAGCTCGTTGGAGTGCATTGCATCAAGTGGTTCCAGTACTCTGGA  2500
                                                        
seq2  --------------------------------------------------  0

seq1  GTGCTCTGGCTTTGGGGAGAG--CAATGGACTGCTGGACACTGACAATCC  2548
               ||||||||||||   |||||||||||||||||||||||| |
seq2  ---------CTTTGGGGAGAGGCAAATGGACTGCTGGACACTGACAATAC  41

seq1  ACTGCCAGGGAACAATGGGCCAAAGCT-CAAAACATGGGAGAAACCAGAG  2597
        ||||||||||||||||||| ||||| | ||||||||||||||||||||
seq2  CATGCCAGGGAACAATGGGCCGAAGCTCCCAAACATGGGAGAAACCAGAG  91

seq1  GCCCT-AGGCATGC-TCCATGTCCC-GAAGGGCCTGGACATAATCAATGG  2644
      ||||| |||||||| |||||||||| ||||||||||||||||||||||||
seq2  GCCCTAAGGCATGCTTCCATGTCCCAGAAGGGCCTGGACATAATCAATGG  141

seq1  CAGCTGTTCCC-TGCTCCACCAAGACCTGGGCACCTAGAATTCATGCAGC  2693
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGTTCCCTTGCTCCACCAAGACCTGGGCACCTAGAATTCATGCAGC  191

seq1  AATTCCCATGTTCCTTACCATTTAACTCAGGTGACCTAGGGCAAGTCAGC  2743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCCCATGTTCCTTACCATTTAACTCAGGTGACCTAGGGCAAGTCAGC  241

seq1  AACACCACAACAGTTCGATGGAGACTCAGTTGGACGACATAAACACTCAG  2793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACCACAACAGTTCGATGGAGACTCAGTTGGACGACATAAACACTCAG  291

seq1  CCAATGCTGTGGGGCCATTTCCTCTGCATGTTTTCCATGGACCATTCTGG  2843
      ||||||||||||||||||||||||||||||||||| ||||||||| ||||
seq2  CCAATGCTGTGGGGCCATTTCCTCTGCATGTTTTCAATGGACCATACTGG  341

seq1  AAAGGGAATGCAACCCTGTGAAGACAACACAAAGAACATGCCCTGATTAC  2893
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAAGGGAATGCAACCCTGTGAAGACAACACAAAGAACATGCCCCGATTAC  391

seq1  AGTGGGACCAATGCAAAACCACATGGATTATGGGCTTACCATGTACTATG  2943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGACCAATGCAAAACCACATGGATTATGGGCTTACCATGTACTATG  441

seq1  GGCTTGTCATATCTCACAGGCACCCTCAACACTCCTGCTCTTACCAACCT  2993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTGTCATATCTCACAGGCACCCTCAACACTCCTGCTCTTACCAACCT  491

seq1  CTTCACACTGCCCTTCCAGATCTCACTTGCTGTTACTCTCAGGCCTTGGA  3043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACACTGCCCTTCCAGATCTCACTTGCTGTTACTCTCAGGCCTTGGA  541

seq1  TGTGAACATGCCATGCCCTTTGTCTCAAGTGCTTGCTGGGTCCTCAGCTC  3093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACATGCCATGCCCTTTGTCTCAAGTGCTTGCTGGGTCCTCAGCTC  591

seq1  ACTCTAAGGACTTAAGGATGATATGTGAGCTGCAATACTGGTACTCAACA  3143
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  ACTCTAAGGACTTAAGGATGATATGTGAGCTGCAATACAGGTACTCAACA  641

seq1  CTTTCTCTTAGGTCTTTGCCATCAACTTCCTCCACCAGTGTCCTGAGCAT  3193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTTAGGTCTTTGCCATCAACTTCCTCCACCAGTGTCCTGAGCAT  691

seq1  AGTTTTCACGGGAATGAAGGCTCTTCTCCAAGCATGCAGTCAGAAAAAGC  3243
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTCAAGGGAATGAAGGCTCTTCTCCAAGCATGCAGTCAGAAAAAGC  741

seq1  CAATAACAAGGGCAATCATAGGTCCCCTTGCCTATGCAGTCGAAGAAGGA  3293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACAAGGGCAATCATAGGTCCCCTTGCCTATGCAGTCGAAGAAGGA  791

seq1  GGAGGCAGCTCTGAATAACTCCACCAGCAAAATTGGGCCTCCAAGGATAT  3343
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GGAGGCAGCTCTGAATAACTCCACCAGCAATATTGGGCCTCCAAGGATAT  841

seq1  CTAAGCCAACAACTTTTGAGCCTTCAATCATGGCTCCAGTCCTTCTCTGA  3393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCCAACAACTTTTGAGCCTTCAATCATGGCTCCAGTCCTTCTCTGA  891

seq1  TCATTGCTTCTGGGACTTTGCATGAGGTAAAATCAAACTCCTCTGAGAGT  3443
      ||||| |||||||| |||||||||||||||||||||||||||||||||||
seq2  TCATTACTTCTGGGTCTTTGCATGAGGTAAAATCAAACTCCTCTGAGAGT  941

seq1  TCAGAATTC  3452
      |||||||||
seq2  TCAGAATTC  950

seq1: chr7_66940056_66940178
seq2: B6Ng01-349A02.g_84_184

seq1  GGGAAGCAGGCTTCATTTTCACAGTTGAAAGGAAACCCCCTCTCGGTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCAGGCTTCATTTTCACAGTTGAAAGGAAACCCCCTCTCGGTCCC  50

seq1  TCTCTCTGTGTTAGTGTGTGCGTGTGTGTGTGTGTGCGCGCGTGTGTGTG  100
      |||||||||||||||||||| ||||||||||||||      |||||||||
seq2  TCTCTCTGTGTTAGTGTGTGTGTGTGTGTGTGTGT------GTGTGTGTG  94

seq1  TGTGTGTGTGTGTGTGTGTGTGT  123
      |||||||                
seq2  TGTGTGT----------------  101