BAC Information

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BAC

Clone NameB6Ng01-349P22
Chromosome7 (Build37)
Map Location 22,330,564 - 22,331,657
singlet/doubletsinglet
Overlap geneLOC100043016
Upstream geneLOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358
Downstream geneLOC100043602, LOC100043604, EG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094, LOC100043625, LOC100043626, LOC100043043, LOC100043048, LOC100043632, EG667485, V1rd14, LOC100043051, LOC100043058, EG435947, EG667504, EG667512
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-349P22.bB6Ng01-349P22.g
ACCGA130810GA130811
length6141,100
definitionB6Ng01-349P22.b B6Ng01-349P22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactaaatggctgagtagcacctgaataaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacagccctgagat
tccatctcacaccaatcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacaccccaccattgctggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtaccacaggaggatcccgcaatacctctcctgggc
atttagttcttaatttgtgttctctttactgtgtctctgtttagtttata
cttccatgatctgtccattgatgagagtggggtgatgaagtctcccacta
ttattgtgtgaggtgcaatgtgtgcttttagctttaataatgtttcattt
atgaatatgtgtctccttgcatttggagcatagatgttcagaattgagag
ttctttttggtagatttttcctttgatcagtatgaagtgtccttttatac
cttttatgataactgttggtttaaagttgattttatttgatattagaatg
gctactccagcttt

gaattcaattacacaattttattattagcaatcttacatgttattctgat
acacataatttttaatatgttgctataacataaggaaattcaattaatag
tttttatgctgcatttatatattgttttatttttaatgatttagttatat
cccaattgaagcctcccctccctcctaattgtattgaattctgatgatgg
gatcacatgttcaaattactctctttcctgtctgtattcatatgcaagaa
ccaatgtgtgttaaaattgtgttattgtgttcttgagctactggaccaat
aaatttttagttgcattacaaaatttatctcaaggccagagtaataaaat
caggataaaattttatttgagttattatatatacattgttttccaggcaa
tttacctgtagtgtgatagaatagtgtctcacttatcaagtgaagaaatt
gtgtcaaatcaattggtaagtgtggacaataaaacagagaccctagaaga
gtagtgtccgacctaatcatcactccagggtcctgtaaagccctctccat
gtctgttcatgataaatccgtgaaaaccactgaggaagtggctcttcagc
tcctcttgctttgccagtttggggttgggactgtggccaatgtctttctg
tttgtccataatttctctccagtcttgactggttataaacagagacccag
acaggtgattttaagccacatggctgtggccaatgccttgactctattcc
tcactatatttccaaacaacatgatggcttttgctcccaaaactcctcca
aatgaactcaaatgtaaattagaatccttcagtcgcctggtggcaagaag
cacaaacttgtgttccacctgtgtcctgagtatccatcagtttgtcactc
tttttcctcttagtagaggtaaaggttaaacttatactcagagcaagtgt
ccaaaatttggcgagttatttcttgttacagttgttgggtttttcagtgt
tcttaagttaacattccacattcaaataaggtcactggttccaccagata
cgaacataacactgacttctaaagcaacttgttctgttccaccttctgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_22330564_22331657
seq2: B6Ng01-349P22.g_66_1165 (reverse)

seq1  TCCAGAA-GTGGAACAGAACAAGTTGCTTTTAGAGTCAGTGTTATTGTCT  49
      ||||||| ||||||||||||||||||||||   ||||||||||||  || 
seq2  TCCAGAAGGTGGAACAGAACAAGTTGCTTTAGAAGTCAGTGTTATGTTC-  49

seq1  GTTATCT-GTGG-ACCAGTGACCCTAATTGGAATGTGG-ATGTT-ACTTA  95
        ||||| |||| |||||||| ||| ||| |||||||| ||||| |||||
seq2  -GTATCTGGTGGAACCAGTGA-CCTTATTTGAATGTGGAATGTTAACTTA  97

seq1  AG-ACACTGAAAAA-CCAACAACTGTAACAAG-AATAACTCGCCAAATTT  142
      || ||||||||||| ||||||||||||||||| |||||||||||||||||
seq2  AGAACACTGAAAAACCCAACAACTGTAACAAGAAATAACTCGCCAAATTT  147

seq1  TGGACACTTGCTCTGAGTATAAGTTT-ACCTTTACCTCTACTAAGAGGAA  191
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGGACACTTGCTCTGAGTATAAGTTTAACCTTTACCTCTACTAAGAGGAA  197

seq1  AAAGAGTGACAAACTGATGGATACTCAGGACACAGGTGGAACACAAGTTT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTGACAAACTGATGGATACTCAGGACACAGGTGGAACACAAGTTT  247

seq1  GTGCTTCTTGCCACCAGGCGACTGAAGGATTCTAATTTACATTTGAGTTC  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTCTTGCCACCAGGCGACTGAAGGATTCTAATTTACATTTGAGTTC  297

seq1  ATTTGGAGGAGTTTTGGGAGCAAAAGCCATCATGTTGTTTGGAAATATAG  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAGGAGTTTTGGGAGCAAAAGCCATCATGTTGTTTGGAAATATAG  347

seq1  TGAGGAATAGAGTCAAGGCATTGGCCACAGCCATGTGGCTTAAAATCACC  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAATAGAGTCAAGGCATTGGCCACAGCCATGTGGCTTAAAATCACC  397

seq1  TGTCTGGGTCTCTGTTTATAACCAGTCAAGACTGGAGAGAAATTATGGAC  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGGGTCTCTGTTTATAACCAGTCAAGACTGGAGAGAAATTATGGAC  447

seq1  AAACAGAAAGACATTGGCCACAGTCCCAACCCCAAACTGGCAAAGCAAGA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGAAAGACATTGGCCACAGTCCCAACCCCAAACTGGCAAAGCAAGA  497

seq1  GGAGCTGAAGAGCCACTTCCTCAGTGGTTTTCACGGATTTATCATGAACA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGAAGAGCCACTTCCTCAGTGGTTTTCACGGATTTATCATGAACA  547

seq1  GACATGGAGAGGGCTTTACAGGACCCTGGAGTGATGATTAGGTCGGACAC  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGAGAGGGCTTTACAGGACCCTGGAGTGATGATTAGGTCGGACAC  597

seq1  TACTCTTCTAGGGTCTCTGTTTTATTGTCCACACTTACCAATTGATTTGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTTCTAGGGTCTCTGTTTTATTGTCCACACTTACCAATTGATTTGA  647

seq1  CACAATTTCTTCACTTGATAAGTGAGACACTATTCTATCACACTACAGGT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTTCTTCACTTGATAAGTGAGACACTATTCTATCACACTACAGGT  697

seq1  AAATTGCCTGGAAAACAATGTATATATAATAACTCAAATAAAATTTTATC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCCTGGAAAACAATGTATATATAATAACTCAAATAAAATTTTATC  747

seq1  CTGATTTTATTACTCTGGCCTTGAGATAAATTTTGTAATGCAACTAAAAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTTATTACTCTGGCCTTGAGATAAATTTTGTAATGCAACTAAAAA  797

seq1  TTTATTGGTCCAGTAGCTCAAGAACACAATAACACAATTTTAACACACAT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTGGTCCAGTAGCTCAAGAACACAATAACACAATTTTAACACACAT  847

seq1  TGGTTCTTGCATATGAATACAGACAGGAAAGAGAGTAATTTGAACATGTG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTTGCATATGAATACAGACAGGAAAGAGAGTAATTTGAACATGTG  897

seq1  ATCCCATCATCAGAATTCAATACAATTAGGAGGGAGGGGAGGCTTCAATT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATCATCAGAATTCAATACAATTAGGAGGGAGGGGAGGCTTCAATT  947

seq1  GGGATATAACTAAATCATTAAAAATAAAACAATATATAAATGCAGCATAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATATAACTAAATCATTAAAAATAAAACAATATATAAATGCAGCATAA  997

seq1  AAACTATTAATTGAATTTCCTTATGTTATAGCAACATATTAAAAATTATG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATTAATTGAATTTCCTTATGTTATAGCAACATATTAAAAATTATG  1047

seq1  TGTATCAGAATAACATGTAAGATTGCTAATAATAAAATTGTGTAATTGAA  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCAGAATAACATGTAAGATTGCTAATAATAAAATTGTGTAATTGAA  1097

seq1  TTC  1094
      |||
seq2  TTC  1100


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