BAC Information

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BAC

Clone NameB6Ng01-350F22
Chromosome7 (Build37)
Map Location 14,245,656 - 14,384,056
singlet/doubletdoublet
Overlap geneLOC100042624, LOC100043194, Sult2a1
Upstream geneVmn2r55, LOC629079, LOC629081, EG232875, LOC100043128, LOC100042515, Zfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267
Downstream geneEG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350F22.bB6Ng01-350F22.g
ACCGA131060GA131061
length1,1501,123
definitionB6Ng01-350F22.b B6Ng01-350F22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,382,888 - 14,384,056)(14,245,656 - 14,246,207)
sequence
gaattctttatattttctttaatataaccctctggggaattaaaattaac
ttatgtgatgatacagaaagaaagtaatgtgatagagaaaagaatggctt
ctattgtcattccttttggattcaaatacacacacattcactgtcatact
gataacatctcaaagactaatttttcctcatcagcaaaataggagaactg
cctatacctacctcaggtattcacgaatttatttaacaatcccacactga
gtatgtcctatatgtttggcactctttgtaaaatgaaccatttagtaatt
tcagaaacactttcttttcaaatatattaggtgcatattctgtgtgtata
ttcaaagaataaatgcatggtacacataacagtgtcacagctaggaaata
aagcaaggatggggcctgctgggttgtaaatggaggaaagatgggaagag
aagtttacagtgtcattaataaaaagacaaagagaaagatgtaattatat
gaaaaataatagccctctagggtgaaggaagatacagtttgggcagtttg
ttaatctttaaggttccaactagagacattctgggatgaactggtgaaaa
acaatatatggtcagaagacacagtgctacataggacagggcctgaaatt
atacagatcttcatgcatcagcaaacaccatggatgaatgaaacagagtc
ctgtaattccctcagctggcaggggctgggtccactgtatctggtgagaa
aatcaagatacttgaaatgcctcagataactgtgtgtatctgcatcactt
gtgaacccacacacacataagtagaaactactttaaaatattagttaaaa
cttgctttaaaatcatttacttctgtaagtaaatattaagatgtagacag
aacacttgaagtctgtttggatcattgagatgataaaaactgctgagttg
gatagcatgataggaacagtttgatgggaaacaggataacctgtgtatat
ataaaagatcaagccagtgtgctgctgtagattgtctagcatatagttgg
gaaagaatgtagacatatttagacgagggagaggtttgtatatatgaatt
cagactcagagttcaggtagcggtgtggtggctacaccttaatcagcact

gaattctttattgtttctacttccacttgtagatcctggatggttttgtt
caattatttcaccggattggatgtgctcttctgtgtttctttaagggagt
tatttatttccatctgatagtcctccatcatcatcaaaataagtgacatt
agattcatatcttgtgtgatgttgtatccaggacttgctatggtgggaca
gtttggttctgatgatgccaagtagccttggtttctgttgcttctgttct
tacacttgtctcctgttatctgattatctcaagtgcttgcagccctcaat
atgtctgattggagcctgtccttcctgtaatcccagttgattcaggactc
ctcagagttttattttatgtctaggtgccttttatctgcatgtatgtacg
tgaaccataacgagagcattacccacagtgtccaggagtataaattatct
ggttgaactgaagttacagaagataatgagttaccatgatggtacaggaa
ctgaaccaacatcttctgtgggagcagcaagtgttctagaatcctgagtc
atctctccagtcctattgctttttaaaaacatccattccaattaattctg
cctatacatttttgggtatatgaatattcactgtggttggataaacactc
ataaagtaaactgactctcttcaggaagctatcaatcactagtagttcct
catagttggcacatcatgaccatgcttgctccatgcagggactcaatctc
acttaagcttatacagatcttgcacatactgtcacaactgctgaatacat
gtgtccaactgccgggaaatgttcaaaaaacactgttttagttaagtcat
tcacccactctgcctctataatatgtcacatctatatccaacatgatccc
tgaacatcggagaaaaagattattttagaagccaaatttaatgctcacca
gtccagagtctctcatgtctgcacttaagagctgtggtctgtgacttaac
ccctctttactacatggataacttttctgatgtgatttgagatgactaac
aatcatgaaagtcatatgatgtgttctgaagaagatttaaaactcaatcc
tgaataaatagtcttagattgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14382888_14384056
seq2: B6Ng01-350F22.b_44_1193 (reverse)

seq1  AGTGCTGGGATTAAAGGTGTGAGCCACCACACC-CTA-CTGAAAATTTCT  48
      ||||||  |||| ||||||| |||||||||||| ||| |||||     ||
seq2  AGTGCT--GATT-AAGGTGT-AGCCACCACACCGCTACCTGAA-----CT  41

seq1  -TAAGTCCTGAAATCATATATACAAACTTCTCCCTCTGTCTAAATTATGT  97
       | ||| ||||| |||||||||||||| |||||||| ||||||| |||||
seq2  CTGAGT-CTGAATTCATATATACAAACCTCTCCCTC-GTCTAAA-TATGT  88

seq1  CCTACCATTTCCTTTCCCAACCTATATGCTAGACAATCTAACAGCAGCAA  147
       ||| ||||  ||||||||| |||||||||||||||||| |||||||| |
seq2  -CTA-CATT--CTTTCCCAA-CTATATGCTAGACAATCT-ACAGCAGC-A  131

seq1  CACTGGCTTGATCTTTTTATATATACACAGGTTATTCCTGTTTCCCATCA  197
      ||||||||||||| |||||||||||||||||||| |||||||||||||||
seq2  CACTGGCTTGATC-TTTTATATATACACAGGTTA-TCCTGTTTCCCATCA  179

seq1  AACCTGTTCCTATCATGCTATCCAACTCAGCAGTTTTTATCATCTCAATG  247
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AA-CTGTTCCTATCATGCTATCCAACTCAGCAGTTTTTATCATCTCAATG  228

seq1  ATCCAAACAGACTTCAAGTGTTCTGTCTACATCTTAATATTTACTTACAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAACAGACTTCAAGTGTTCTGTCTACATCTTAATATTTACTTACAG  278

seq1  AAGTAAATGATTTTAAAGCAAGTTTTAACTAATATTTTAAAGTAGTTTCT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAATGATTTTAAAGCAAGTTTTAACTAATATTTTAAAGTAGTTTCT  328

seq1  ACTTATGTGTGTGTGGGTTCACAAGTGATGCAGATACACACAGTTATCTG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATGTGTGTGTGGGTTCACAAGTGATGCAGATACACACAGTTATCTG  378

seq1  AGGCATTTCAAGTATCTTGATTTTCTCACCAGATACAGTGGACCCAGCCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATTTCAAGTATCTTGATTTTCTCACCAGATACAGTGGACCCAGCCC  428

seq1  CTGCCAGCTGAGGGAATTACAGGACTCTGTTTCATTCATCCATGGTGTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAGCTGAGGGAATTACAGGACTCTGTTTCATTCATCCATGGTGTTT  478

seq1  GCTGATGCATGAAGATCTGTATAATTTCAGGCCCTGTCCTATGTAGCACT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGCATGAAGATCTGTATAATTTCAGGCCCTGTCCTATGTAGCACT  528

seq1  GTGTCTTCTGACCATATATTGTTTTTCACCAGTTCATCCCAGAATGTCTC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTTCTGACCATATATTGTTTTTCACCAGTTCATCCCAGAATGTCTC  578

seq1  TAGTTGGAACCTTAAAGATTAACAAACTGCCCAAACTGTATCTTCCTTCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGGAACCTTAAAGATTAACAAACTGCCCAAACTGTATCTTCCTTCA  628

seq1  CCCTAGAGGGCTATTATTTTTCATATAATTACATCTTTCTCTTTGTCTTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGAGGGCTATTATTTTTCATATAATTACATCTTTCTCTTTGTCTTT  678

seq1  TTATTAATGACACTGTAAACTTCTCTTCCCATCTTTCCTCCATTTACAAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAATGACACTGTAAACTTCTCTTCCCATCTTTCCTCCATTTACAAC  728

seq1  CCAGCAGGCCCCATCCTTGCTTTATTTCCTAGCTGTGACACTGTTATGTG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCAGGCCCCATCCTTGCTTTATTTCCTAGCTGTGACACTGTTATGTG  778

seq1  TACCATGCATTTATTCTTTGAATATACACACAGAATATGCACCTAATATA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGCATTTATTCTTTGAATATACACACAGAATATGCACCTAATATA  828

seq1  TTTGAAAAGAAAGTGTTTCTGAAATTACTAAATGGTTCATTTTACAAAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAAAGAAAGTGTTTCTGAAATTACTAAATGGTTCATTTTACAAAGA  878

seq1  GTGCCAAACATATAGGACATACTCAGTGTGGGATTGTTAAATAAATTCGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCAAACATATAGGACATACTCAGTGTGGGATTGTTAAATAAATTCGT  928

seq1  GAATACCTGAGGTAGGTATAGGCAGTTCTCCTATTTTGCTGATGAGGAAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACCTGAGGTAGGTATAGGCAGTTCTCCTATTTTGCTGATGAGGAAA  978

seq1  AATTAGTCTTTGAGATGTTATCAGTATGACAGTGAATGTGTGTGTATTTG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGTCTTTGAGATGTTATCAGTATGACAGTGAATGTGTGTGTATTTG  1028

seq1  AATCCAAAAGGAATGACAATAGAAGCCATTCTTTTCTCTATCACATTACT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAAAAGGAATGACAATAGAAGCCATTCTTTTCTCTATCACATTACT  1078

seq1  TTCTTTCTGTATCATCACATAAGTTAATTTTAATTCCCCAGAGGGTTATA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTGTATCATCACATAAGTTAATTTTAATTCCCCAGAGGGTTATA  1128

seq1  TTAAAGAAAATATAAAGAATTC  1169
      ||||||||||||||||||||||
seq2  TTAAAGAAAATATAAAGAATTC  1150

seq1: chr7_14245656_14246207
seq2: B6Ng01-350F22.g_652_1185

seq1  AATTAATTCTGCCTATACATTTTTGGGTATATGAATATTCACTGTGGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAATTCTGCCTATACATTTTTGGGTATATGAATATTCACTGTGGTTG  50

seq1  GATAAACACTCATAAAGTAAACTGACTCTCTTCAGGAAGCTATCAATCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACACTCATAAAGTAAACTGACTCTCTTCAGGAAGCTATCAATCAC  100

seq1  TAGTAGTTCCTCATAGTTGGCACATCATGACCATGCTTGCTCCATGCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGTTCCTCATAGTTGGCACATCATGACCATGCTTGCTCCATGCAGG  150

seq1  GACTCAATCTCACTTAAGCTTATACAGATCTTGCACATACTGTCACAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAATCTCACTTAAGCTTATACAGATCTTGCACATACTGTCACAACT  200

seq1  GCTGAATACATGTGTCCAACTGCCGGGAAATGTTCAAAAAACACTGTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAATACATGTGTCCAACTGCCGGGAAATGTTCAAAAAACACTGTTTT  250

seq1  AGTTAAGTCATTCACCCACTCTGCCTCTATAATATGTCACATCTATATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAGTCATTCACCCACTCTGCCTCTATAATATGTCACATCTATATCC  300

seq1  AACATGATCCCTGAACATCGGAGAAAAAGATTATTTTAGAAGCCAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGATCCCTGAACATCGGAGAAAAAGATTATTTTAGAAGCCAAATTT  350

seq1  AATGCTCACCAGTCCAGAGTCTCTCATTGTCTGCACCTTTAAGAGCTGTG  400
      |||||||||||||||||||||||||| |||||||||  ||||||||||| 
seq2  AATGCTCACCAGTCCAGAGTCTCTCA-TGTCTGCAC--TTAAGAGCTGT-  396

seq1  GGTCTGTGACTTAACCCCTCTTTACTACATGGATAAACTTTTCTGATGGT  450
      |||||||||||||||||||||||||||||||||| |||||||||||||  
seq2  GGTCTGTGACTTAACCCCTCTTTACTACATGGAT-AACTTTTCTGATG--  443

seq1  GGATTTGAGATGAACTAAACAATCATGAAAAGTCATTATGATGTGGTTTC  500
       ||||||||||| ||| |||||||||| ||||||| |||||||||  |||
seq2  TGATTTGAGATG-ACT-AACAATCATG-AAAGTCA-TATGATGTG--TTC  487

seq1  TGAAGAAGATTTAAAAACTCATTCTTGGAATAAATAGGTCTTAGAAATTG  550
      |||||||||||| |||||||| || | ||||||||| |||||||  ||||
seq2  TGAAGAAGATTT-AAAACTCAATCCT-GAATAAATA-GTCTTAG--ATTG  532

seq1  GA  552
      ||
seq2  GA  534