Query= MSMg01no045_b13.b1 MSMg01no045_b13.b1 CHROMAT_FILE:
MSMg01no045_b13.b1 PHD_FILE: MSMg01no045_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:04:57 2005
(659 letters)
>mm_chr7_66407254_66408312
Length = 1059
Score = 1147 bits (593), Expect = 0.0
Identities = 637/655 (97%), Gaps = 6/655 (0%)
Strand = Plus / Plus
Query: 5 gaattcattgtttttaatagctgagtagtactcctttgtgtaaacatatcacattttctg 64
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 211 gaattcattgtttttaatagctgagtagtactcctttgtgtaaacgtatcacattttctg 270
Query: 65 aatccatttctcattgaggtacatctgggttctttccagcttcttgctattataaataag 124
|||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 aatccattcctcattgaagtacatctgggttctttccagcttcttgctattataaataag 330
Query: 125 gctgttatgaacattgtggagcatgtgtccttattacaagttggagcatcttctgggtag 184
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 331 gctgttatgaacattgtggagcatgtgtccttattacaagttggaacatcttctgggtag 390
Query: 185 ggtatatacccaagagtggtattgctggatcttccagtagtaccatatccaattttctga 244
||||||| ||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 391 ggtatatgcccaagagtggtattgctggatcttccagtagtactatgtccaattttctga 450
Query: 245 ggaaccgccagactgatttccagcgtggttgtactagcttgcaatcccaccagcaatgga 304
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 451 ggaaccgccagactgatttccagcgtggttgtactagcttgcaatcccaccaacaatgga 510
Query: 305 ggagtgtttctctaaataaaaaaattaaaaaaaaagatctcagtatactttgatccaagt 364
||||||||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 511 ggagtgtttctctaaattaa------aaaaaaaaagatttcagtatactttgatccaagt 564
Query: 365 attagaaatggacaataagaaggacttgatttcatttctagatttaggaaatatggaatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 attagaaatggacaataagaaggacttgatttcatttctagatttaggaaatatggaatc 624
Query: 425 tttaagaataaagtgtaagtggcatgaacttaaaacaggaggtatcttgaacagaaaaga 484
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttaagaataaactgtaagtggcatgaacttaaaacaggaggtatcttgaacagaaaagg 684
Query: 485 gcacttagagacagccatggaaggtatgtttgccccaagagctgaaatggccagatgtcc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gcacttagagacagccatggaaggtatgtttgccccaagagctgaaatggccagatgtcc 744
Query: 545 ttgttgttctataattcaaaggtacatgagtcattctcgtttaatttcaaagttatttca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttgttgttctataattcaaaggtacatgagtcattctcgtttaatttcaaagttatttca 804
Query: 605 ttttcaccagtccaatattgtttttgaaaattaaaattccctctcacaatttaaa 659
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttttcaccagtccaatattgtttttgaaaattaaaattccctctcacaatttaaa 859
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space: 680801
Effective search space used: 680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_b13.g1 MSMg01no045_b13.g1 CHROMAT_FILE:
MSMg01no045_b13.g1 PHD_FILE: MSMg01no045_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:04:58 2005
(626 letters)
>mm_chr7_66489456_66490481
Length = 1026
Score = 1154 bits (597), Expect = 0.0
Identities = 623/639 (97%), Gaps = 14/639 (2%)
Strand = Plus / Minus
Query: 1 aagggcagtctgcactacatgtccagatacagtctatcctaggttacataccttgatttt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 956 aagggcagtctgcactacatgtccagatacagtctatcctaggttacataccatgatttt 897
Query: 61 tatcaactactacta------------ctccgccgccaccaccaccactgccgccacagc 108
||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 896 tatcaactactactactccgccgccacctccgccgccaccaccaccactgccgccacagc 837
Query: 109 taccaccatccatccacgcacacacccacacacataccccatcaccattcaaactagatt 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 taccaccatccatccacgcacacacccacacacataccccatcaccattcaaactagatt 777
Query: 169 tctaaggctccataacatatttttttcaaagtatttttttcaacctagtgatgtagctca 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tctaaggctccataacatatttttttcaaagtatttttttcaacctagtgatgtagctca 717
Query: 229 ctgctaggtagcaaggccctgtattctatccccagctatataaaactaaaattgaaggat 288
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 716 ctgctaggtagcaaggccctgtattctatccccagctatgtaaaactaaaattgaaggat 657
Query: 289 ttttttttaatatctgatttctgtcaaattaatgagagttgtgctatactgcttaaatga 348
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 ttttttt-aatatctgatttctgtcaaattaatgagagttgtgctatactgcttaaatga 598
Query: 349 tgttgacaggtaagaaagaccaaattctgaaatgtactgagctgctgctaagagtaacaa 408
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 tgttgacaggtaagaaagaccaaattctgaaatgtactgagctgctgctaagagtaacaa 538
Query: 409 cagattacacacaaggttatgtgtaaggaaa-ttttatcctgctcatataaaaagttcag 467
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 537 cagattacacacaaggttatgtgtaaggaaaattttatcctgctcatataaaaagttcag 478
Query: 468 tacctatatactactactactactactctggtttcactcaaataaggatgccagcttcag 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 tacctatatactactactactactactctggtttcactcaaataaggatgccagcttcag 418
Query: 528 caagatttacataggattctccttcataagcctaatgcaatttcttcgtgaggcttctcc 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 caagatttacataggattctccttcataagcctaatgcaatttcttcgtgaggcttctcc 358
Query: 588 tcagatttgctacaactgaactgcaagaataagcttaac 626
|||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tcagatttgctacaactgaactgcaagaataagcttaac 319
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
