Query= MSMg01no045_d17.b1 MSMg01no045_d17.b1 CHROMAT_FILE:
MSMg01no045_d17.b1 PHD_FILE: MSMg01no045_d17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:08 2005
(641 letters)
>mm_chr7_76659237_76660278
Length = 1042
Score = 1151 bits (595), Expect = 0.0
Identities = 631/643 (98%), Gaps = 2/643 (0%)
Strand = Plus / Plus
Query: 1 ttttcttgtcaaa-ttatctttgttctctttttccctttttgttttaatatgaatttaga 59
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ttttcttgtcaaaattatctttgttctctttttccctttttgttttaatatgaatttaga 259
Query: 60 aacaccttatcaacttatacaagaatataactagaattctacatgcagttacaaaggatg 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 aacaccttatcaacttatacaagaatataactagaattctacatgcagttacaaaggatt 319
Query: 120 tataaattaataacactgtctcttcatgcatgtcttccaatccacaaacatgaagcacct 179
||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 320 tataaattaataacactgtcttttcatgtttgtcttccaatccacaaacatgaagcacct 379
Query: 180 acacatttatcctggccttttacaaagtgcacacactttttactaaatttctgtttgcat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 acacatttatcctggccttttacaaagtgcacacactttttactaaatttctgtttgcat 439
Query: 240 actttaattcatttttacaccattataagcattttataattttaagttttggaattttta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 actttaattcatttttacaccattataagcattttataattttaagttttggaattttta 499
Query: 300 ttattaatatacagaaaacacttagttttgcttatatttgtaatccttcatgcggttcaa 359
||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 500 ttattaatatacagaaaacacgtagttttgcttatatttgtaatcctttatgcggttcaa 559
Query: 360 ctattctaatactttttttt-ctgagttctctataatttcctgcagaaaatattgtatca 418
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttattctaatactttttttttctgagttctctataatttcctgcagaaaatattgtatca 619
Query: 419 atcatggataggaagaaagttgtccttgctctctgggcttcttatcaagcataaccacac 478
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 620 atcatggataggaagaaagttgtccttactctctgggcttcttatcaagcataaccacac 679
Query: 479 cataataaagatgcaacagtctatacatgttcaaactagattttttttttattctctacg 538
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 680 cataataaagatgcaacagtctatacatattcaaactagattttttttttattctctacg 739
Query: 539 actaaaatgttacttgcaaggtaaaatatgaaattcaccgatatgtagggtcaattgaag 598
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 740 actaaaatgttacttgcaaggtaaaatatggaattcaccgatatgtagggtcaattgaag 799
Query: 599 tttatttcttcctttataacttgaacaatttttttcattctat 641
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 tttatttcttcctttataacttgaacaatttttttcattctat 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 641
Length of database: 1042
Length adjustment: 10
Effective length of query: 631
Effective length of database: 1032
Effective search space: 651192
Effective search space used: 651192
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_d17.g1 MSMg01no045_d17.g1 CHROMAT_FILE:
MSMg01no045_d17.g1 PHD_FILE: MSMg01no045_d17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:08 2005
(637 letters)
>mm_chr7_76797089_76798126
Length = 1038
Score = 1172 bits (606), Expect = 0.0
Identities = 630/638 (98%), Gaps = 2/638 (0%)
Strand = Plus / Minus
Query: 1 actttttggattcttgaaggtagaagccagtggaatgaaatataattcaaattcaaagga 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 actttttggattcttaaaggtagaagccagtggaatgaaatataattcaaattcaaagga 719
Query: 61 gaaatgggaaccatatttggaatttcagcaaagtaaggagaaaggagtaacattccagga 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 718 gaaatgggaaccatatttggaatttcagcaaagtaaggagaaaggaggaacattccagga 659
Query: 121 gtacaatgtaactcatttttatggatgtaatattaaaaatcatatttcaaaatctgagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 gtacaatgtaactcatttttatggatgtaatattaaaaatcatatttcaaaatctgagtc 599
Query: 181 ttcttcttcatattaatatttattgcctggcaatttccttcatctatgccataaaacaat 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 ttcttcttcatgttaatatttattgcctggcaatttccttcatctatgccataaaacaat 539
Query: 241 gacatttttgcctgatagattttccaaccaccaattatataaacaagtagataagggaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gacatttttgcctgatagattttccaaccaccaattatataaacaagtagataagggaat 479
Query: 301 t-aaaaaaaatcatgaaatgtataaatatattattttactccaccgagtattgaagaatc 359
| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 478 taaaaaaaaatcatgaaatgtataaatatattattttacttcagtgagtattgaagaatc 419
Query: 360 ctaaaagttaaaggttatcaacttttaggttgcctcttgaattaaccttcagttagaatt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ctaaaagttaaaggttatcaacttttaggttgcctcttgaattaaccttcagttagaatt 359
Query: 420 actctttagtcatctctatttatagaagcccaagtctctggtaagtttatgaagggagtt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 actctttagtcatctctatttatagaagcccaagtctctggtaagtttatgaagggagtt 299
Query: 480 gaaacaaccaacccagtagaggttttaatacagcaatgggtgaaataatgtctataaaac 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gaaacaaccaacccagtagaggttttaatacagcaatgggtgaaataatgtctataaaac 239
Query: 540 actagaagattcttagagacaaaagtttccattgaaagtttttattttataattactttt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 actagaagattcttagagacaaaagtttccattgaaagtttttattttataattactttt 179
Query: 600 tttaaaaatttacttacatttccaaatgttgccctgct 637
|||||||||||||||||||| |||||||||||||||||
Sbjct: 178 tttaaaaatttacttacatt-ccaaatgttgccctgct 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1038
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1028
Effective search space: 644556
Effective search space used: 644556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
