Query= MSMg01no045_f18.b1 MSMg01no045_f18.b1 CHROMAT_FILE:
MSMg01no045_f18.b1 PHD_FILE: MSMg01no045_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:17 2005
(431 letters)
>mm_chr7_65896937_65897767
Length = 831
Score = 739 bits (382), Expect = 0.0
Identities = 421/440 (95%), Gaps = 13/440 (2%)
Strand = Plus / Plus
Query: 1 tcaatataatattctgtgctttatttgtgtttgtcagtgtatcttttaaaattgctaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 tcaatataatattctgtgctttatttgtgtttgtcagtgtatcttttaaaattgctaaat 256
Query: 61 agtgtatacatataaaaatgcatacact----cacacacacacacaccacacagtgttgg 116
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 257 agtgtatacatataaaaatgcatacactcacacacacacacacacaccacacagtgttgg 316
Query: 117 ctatagtgtaagaccaatggaaaaacagacactgacttccataacacatttgtctaccta 176
||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct: 317 ctatagtgtaagaccaatggaaaaacagacaatgacttccacaacacatttgtctaccta 376
Query: 177 ttcactcattgaggaagtaccctagtttctgacttccaggcatcttgttaagagctgcaa 236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ttcactcattgaggaagtaccctagtttctgacttccaggcatcttgttaagagctgcaa 436
Query: 237 tgaacaagcctttcatttgttttatttttt-gtgatagaatcttactctgtaggccatgc 295
|||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 437 tgaacaagcctttcatttgttttatttttttgagatagaatcttactctgtaggccatgc 496
Query: 296 ttggctgaaattcattagccttaaactcatggccatgaccccatctca----cccccctc 351
||||||||||||||||||||| |||||||||||||||||||||||||| || ||
Sbjct: 497 ttggctgaaattcattagcctcaaactcatggccatgaccccatctcaaggtcc----tc 552
Query: 352 agtgctgagtttataggcatgagccacaatgcttggtagtaagccttttgcgtgcgtgta 411
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 553 agtgctgagtttataggcatgagccacaatgcttggcagtaagccttttgcgtgtgtgta 612
Query: 412 ttttcatttctccataatcg 431
||||||||||||||||||||
Sbjct: 613 ttttcatttctccataatcg 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 831
Length adjustment: 9
Effective length of query: 422
Effective length of database: 822
Effective search space: 346884
Effective search space used: 346884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no045_f18.g1 MSMg01no045_f18.g1 CHROMAT_FILE:
MSMg01no045_f18.g1 PHD_FILE: MSMg01no045_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:05:17 2005
(338 letters)
>mm_chr7_66055632_66056370
Length = 739
Score = 542 bits (280), Expect = e-158
Identities = 327/348 (93%), Gaps = 10/348 (2%)
Strand = Plus / Minus
Query: 1 cagtgctttgctacagctgctcctcctgctagctacagtctcagtcttgacatgtgcagt 60
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||
Sbjct: 409 cagtgctttgctacagctgctcctcctgttagctacagtctcaatcttgacatgtgcagt 350
Query: 61 atacttatacatccttcctatccaaaacgactgcaatacttcccagaggaaggtggagat 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 349 atacttatacatccttcctatccaaaacaactgcaatacttcccagaggaaggtggagat 290
Query: 121 ccacacaaacaagtgatttctatttgttctacttgccaggtggcactt-gagaatataag 179
||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 289 ccacacaaacaggtgatttctatttgttctacttgccaggtggcacttggagaatataag 230
Query: 180 atacaactgtcatcacct---------aggccttccagtatgtaaggaatttgagctctg 230
|||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 229 atacaactgtcatcacctaggccttccaggccttccagtatgtaaggaatttgagctctg 170
Query: 231 ttcttatctgctgctatctgcaggtggcaggcttcttccagaaacctaccctagcgggtg 290
| ||||||||||| ||||||||||||||||||||||||| || |||||||||| |||||
Sbjct: 169 tccttatctgctggtatctgcaggtggcaggcttcttcctgaggcctaccctagggggtg 110
Query: 291 gacaggacaaggcgcatgggtacacagcaaccctgcattgtggcagca 338
||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 109 gacaggacaaggcgcatgggtgcacagcaaccctgcattgtggcagca 62
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 739
Length adjustment: 9
Effective length of query: 329
Effective length of database: 730
Effective search space: 240170
Effective search space used: 240170
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
