Query= MSMg01no047_f10.b1 MSMg01no047_f10.b1 CHROMAT_FILE:
MSMg01no047_f10.b1 PHD_FILE: MSMg01no047_f10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:39 2005
(188 letters)
>mm_chr7_87555855_87556442
Length = 588
Score = 327 bits (169), Expect = 3e-94
Identities = 184/189 (97%), Gaps = 2/189 (1%)
Strand = Plus / Plus
Query: 1 acttcttgcattgtgcttgctccatgttcccctcacac-ggtcagagcaggccccacctt 59
|||||||||||||||||||||||||||||||||||| | ||||||||||||| |||||||
Sbjct: 201 acttcttgcattgtgcttgctccatgttcccctcac-caggtcagagcaggctccacctt 259
Query: 60 cctgactctctcttgccagtacagacatgctctaacctgaactctgcacatggccttaac 119
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 260 cctgactctctcttgccagtacagacacgctctaacctgaactctgcacatggccttaac 319
Query: 120 agcatggctctcattcttcctaaagctgtgaccctttaatacagtccctcatattgcgat 179
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 agcatggctctcagtcttcctaaagctgtgaccctttaatacagtccctcatattgcgat 379
Query: 180 gaccccccc 188
|||||||||
Sbjct: 380 gaccccccc 388
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no047_f10.g1 MSMg01no047_f10.g1 CHROMAT_FILE:
MSMg01no047_f10.g1 PHD_FILE: MSMg01no047_f10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:07:39 2005
(380 letters)
>mm_chr7_87689396_87690175
Length = 780
Score = 644 bits (333), Expect = 0.0
Identities = 368/381 (96%), Gaps = 4/381 (1%)
Strand = Plus / Minus
Query: 1 actgctcttatagaagactcaagttcagttcccagcaccccagttaggctgctcacaact 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 actgctcttatagaggactcaagttcagttcccagcaccccagttaggctgctcacaact 686
Query: 61 atctgcgacttcggccccaaggtgatctgatgccccccccccca-acacacacacagaga 119
|||||||||||| ||||||||||||||||||| ||||||||| |||||||||||||||
Sbjct: 685 atctgcgacttcagccccaaggtgatctgatg---ccccccccagacacacacacagaga 629
Query: 120 cacatacatacaccacaaattaattaattttcctaaaattagaaaaaataaaatcaagaa 179
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 628 cacatacacacaccacaaattaattaattttcttaaaattagaaaaaataaaatcaagaa 569
Query: 180 taagtaaaaaaccaactgtccaccttagattcctgagaactggcaaaggttggaaatggg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 taagtaaaaaaccaactgtccaccttagattcctgagaactggcaaaggttggaaatggg 509
Query: 240 caccgaggtgagctcccggttcccgagagggcaaaggcagaggttatggttagaaatctg 299
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 caccgaggggagctcccggctcccgagagggcaaaggcagaggttatggttagaaatctg 449
Query: 300 atgagaaacccagtactctggctatggcccttgtgtgtcccaccaaatggaggccaggca 359
| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 acaagaaacccagtgctctggctatggcccttgtgtgtcccaccaaatggaggccaggca 389
Query: 360 agcctggatcccatcagttgg 380
|||||||||||||||||||||
Sbjct: 388 agcctggatcccatcagttgg 368
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
