| BAC end | BAC-end 1 | BAC-end 2 |
|---|
| end name | MSMg01-048N11.T7 (MSMg01no048_n11.b1) | MSMg01-048N11.TJ (MSMg01no048_n11.g1) |
|---|
| ACC | AG278499 | AG278500 |
|---|
| length | 1,156 | 1,256 |
|---|
length of high quality
(start - end) | --- | 646 (81 - 726) |
|---|
| definition | CHROMAT_FILE: MSMg01no048_n11.b1 PHD_FILE: MSMg01no048_n11.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:10:13 2005 | CHROMAT_FILE: MSMg01no048_n11.g1 PHD_FILE: MSMg01no048_n11.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 12:10:13 2005 |
|---|
| singlet/doublet | --- | singlet |
|---|
| BLAST hit | no hit data | unique |
|---|
| sequence | GGGGGGGCATGCGGCGCTATAGACTACTATAGGGAGAGGATCCGCGGAAT
TCTAAGAGGCTGGGATTTCCCTTAAATTCCGACNGANTAGACTGGGCTCT
GCCCCCTGCCCTGTGAAGAATGATGCTTAAGGATGGCGTGGGAGGAGGAA
AAAGTCGGTGGGGGGTGACACGGATTAGTTTTTTAAGGCAAGGTAACCTT
TTGGCCTTGGAAAGGTGTACCAGCCCTCTGAGGGTTTTTGGGGGAAANTT
GAAAAGNTAAAATTTTTGGCCTGGGGNNAAAAAAAATTGGGGGGTGAAGA
AANTCATCCTCTAGGCNNACTTGGGGNNNNCCCTAAAGAGAGGAAAGAAG
GGNNNNNNNNNGGGGTTTGGGAATATAAAAAANNNNNNTNNNTNTTTATT
TCTTTTTTTTNATCTNNNNNNNTTNNNNTNNNNTAAAAAAGGATGGTNNN
TTGGGGNNNNAGAATGAATTGTTTATAATTTTNTNTTATGGATGTGGTGN
NTTNTTTGTGTGTNNNNCNNNNNNNNNNNNNNNNNNNTTNNTTTGTTATN
NNTTNTNTTNNTTTGTTTNNNNNTNNNNNTTGNNNNNNTNNNNTTTTTTT
TTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTNTTTTTTTTNTNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTNTTTTTTTTTTTCTT
TTTTCTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTCTTTTTTTCTTTTTT
TTCCTTTTTTTCTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTT
CTTTCTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTCTTTTTTTTT
TTCTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTCTT
TTTTNTTCTTTTCTTTTTTTTTTTTTTTTTCTTTTTTTTTCTTTTTTTTA
TTTAATCTATTTATTTTTTTTTTTTTCTTATTTTTTTTTTTTTTTTTTTT
TTATTTTTATTTTTTATTTTTTTAATTTCTTTTTTTTATTTTTTTATTCT
TATTTA
| NNTTTGCGATGTGTAGCTGGGGCGCCXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCCTTTAAGATGCAGTGACCACCACTGATTAGCA
GTCTAAGGCTATGGTGCCATTCAGCAGGTGCCCCCTTTCCAGGCCAACCC
CTCTACCTCAACCCCATGCATGTGTCTACAGTGTGTGTGTGTGTTGGTGT
GTATCTGTGTATCCATGTGCACAGACACAAGAAGAAATGAGACACCAACC
ATCACAGGTCCTCACTGGCACACTGAGTACTTTCTAGCTAACTGGTTGGG
CTATACAAGGCTCCTTGCGAAGACTTGCTAAGGTGGTTGGATTCTAGTGA
TTCCGGCTGAGCCAATGAGCACAAGTCTCCCATAGCTTTATGTTCTAGCC
TGTCAGCAACATCAGCTAGGCAGGCACAGGTGTTAGGAGACACAAATGCA
CTCAAGGACGTGGACCTCAGGTCTAAGCAGAAGGTGTTCCATGTATGCGA
GATGAATGTGTGTGTTCTTTAACCTTAAGGTAAAATGAGGCAGCTTCATT
TGAAAGCTCCATGAGCAGCCTGTCTCATGTAGCTCCTTCTGCACTGAGCC
CCCACCACTGGCTTCCATTGCTTAGGTTTCAACCTGGAAAGGATCCAAGA
GTCCATCAACTTGGCGGAGAAAACCACTTTGGTGTAGCACATCCTTTAAT
TCTTGGTGTGGGCAGCAAGGCTTGTGGCATAACCTGCAGAGATGAAAATT
GAGAGAGGCTGTAAGAAGCCAGCTACATGCCCACGTGACCATGGCTGGCA
GTGCTTGCTTGGAGGCACTCCTTGTCCAGCAGAGCCCTGATCCCTTGATG
TCCTGAAAAATATCAGGGTACATGTGACCTTGTTGTCTCCATCGTCAACT
TGTGAGCTTTTGAAATATCTATTGAACGTTGCTTTATTCTTGTGATCCCC
TTTTCATGACTAAAAATGGAATTCTCATTGTAATTGCTTCATTACTAAAA
AGTCGTTTCTGCGAGGTCTCTAGGCCCTGGTTCCAATTCTTGGGTATTTA
TAATAATATTTTATTATATTATTAATTTCTCTTTTATAAAAAAAAACTCT
TCTTTAAAAAATGGTTTTCTCAAGGTCCTCTTCTAATATCTCCAAAGGCT
TGGGGTGCCAATAATATTGTTTCTTTCCCTTCCAAGTATAATAAAATTTT
TTGCCCCTCCTATTAAATTTTTTCTGTTCGTGTATATTGTCCCACAAATA
TTATTT
|
|---|
| quality values | Open.Hide. 6 6 7 7 6 6 6 9 7 7 7 7 9 12 11 8 8 8 8 8 8 8 8 10 10 8 8 8 8 10 11 13 24 24 17 22 15 16 12 17 15 15 26 20 24 17 18 19 16 20
16 17 15 19 11 23 12 22 10 10 8 10 11 12 17 12 9 10 10 10 10 11 14 12 17 10 9 9 9 11 11 11 3 0 3 3 0 3 8 8 7 6 8 8 10 10 17 10 15 15
11 17 16 23 21 12 12 12 18 12 17 11 6 6 6 6 8 8 8 9 13 19 10 9 10 10 12 11 10 9 9 9 10 14 12 11 11 9 9 9 10 10 10 9 10 10 9 8 8 9
9 9 8 11 11 16 12 9 9 9 12 12 13 10 9 9 9 6 8 6 6 6 7 10 8 8 6 8 8 12 16 26 20 16 15 10 9 9 6 6 6 7 6 6 9 9 10 10 8 7
9 9 9 9 12 10 9 9 9 9 9 9 6 6 6 6 6 8 8 8 8 8 9 10 11 11 8 8 8 8 8 8 8 8 9 8 8 9 9 9 11 12 13 9 6 7 3 0 3 8
12 12 8 7 6 3 0 3 10 9 9 9 11 12 16 16 14 14 9 8 6 6 6 6 7 3 0 0 3 12 12 27 30 14 8 8 8 8 8 8 14 9 8 8 8 9 8 8 8 8
8 3 0 3 7 8 9 10 9 10 6 6 6 6 6 3 0 0 3 10 6 8 8 7 7 3 0 0 0 0 3 8 8 8 8 8 8 6 6 6 6 6 6 8 6 6 6 6 6 6
6 3 0 0 0 0 0 0 0 0 0 3 9 9 11 8 8 8 8 8 8 8 8 8 8 8 8 15 13 7 6 3 0 0 0 0 0 0 3 0 0 0 3 0 3 8 8 8 8 8
8 8 8 12 11 21 18 15 10 3 0 3 6 6 3 0 0 0 0 0 0 0 3 3 0 0 0 0 3 0 0 0 0 3 11 10 10 10 9 8 8 8 6 6 6 6 3 0 0 0
3 7 8 8 8 3 0 0 0 0 3 9 9 9 9 8 8 6 6 6 6 11 11 10 10 9 9 9 9 11 12 3 0 3 0 3 9 9 9 13 10 10 9 9 8 8 8 8 3 0
0 3 3 0 3 6 6 8 9 9 9 9 3 0 0 0 0 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 3 0 0 3 8 19 15 8 8 8 3 0
0 0 3 3 0 3 0 3 3 0 0 3 9 9 9 9 15 3 0 0 0 0 0 3 0 0 0 0 0 3 9 3 0 0 0 0 0 0 3 0 0 0 0 3 13 10 10 9 8 8
10 10 15 13 13 15 15 11 8 8 3 0 3 8 8 8 15 8 9 9 12 9 9 11 8 8 8 10 10 11 9 9 8 11 13 13 10 9 12 10 12 12 16 16 19 18 18 16 20 10
12 10 8 8 8 8 8 3 0 3 6 6 6 10 14 14 3 0 3 0 0 3 13 8 10 10 27 32 37 37 20 21 12 12 10 10 10 10 9 9 9 9 9 9 9 9 9 9 9 8
8 11 8 8 8 8 8 8 8 10 16 20 32 26 16 9 9 9 17 10 10 10 13 8 8 8 12 13 8 8 9 9 9 9 3 0 3 15 17 13 16 16 13 10 10 10 20 15 22 18
19 19 12 10 7 7 8 10 10 8 8 8 8 6 6 8 15 15 16 17 9 9 10 12 9 10 10 10 13 17 15 15 10 9 7 7 6 8 9 10 10 10 17 10 15 10 10 10 13 11
11 11 16 10 8 8 8 8 13 8 8 8 9 9 11 18 27 23 19 11 9 9 12 19 14 16 12 15 12 14 12 10 10 10 10 10 7 6 6 6 12 26 13 17 11 19 16 13 11 8
8 9 13 13 12 10 8 8 10 10 12 8 10 11 26 27 37 33 24 24 21 17 16 10 8 9 9 6 8 6 6 8 13 12 20 24 15 15 9 9 10 14 9 11 18 19 25 30 17 19
16 15 15 8 13 15 22 22 21 18 10 11 11 16 10 11 10 13 9 9 9 9 13 12 9 9 15 17 15 9 9 9 19 19 30 16 21 8 8 8 9 8 17 19 19 19 20 20 17 14
9 8 8 8 8 8 8 8 8 12 8 15 15 16 11 18 18 25 17 14 10 10 10 11 11 11 11 18 32 21 18 11 11 15 13 17 25 22 18 18 15 13 6 6 8 15 8 8 8 13
13 8 8 3 0 3 6 6 8 15 15 8 6 6 9 9 16 9 9 9 9 15 19 22 25 33 33 19 19 11 9 10 15 15 22 25 25 19 15 8 6 6 8 15 17 30 17 17 12 15
10 10 8 8 8 8 10 8 8 8 12 8 8 8 8 17 10 9 9 15 15 11 11 15 19 9 7 7 15 19 15 8 8 11 11 13 15 21 24 21 24 24 12 13 13 21 21 21 26 24
16 10 9 9 15 15 13 8 8 10 8 8 10 8 8 8 8 15 15 27 15 13 8 8 8 8 10 17 19 13 10 10 9 10 10 14 10 10 10 14 16 25 12 15 13 8 8 8 8 8
7 7 10 8 8 6 | Open.Hide. 0 0 3 6 6 6 6 6 8 7 9 6 6 6 6 8 8 6 6 6 7 9 12 13 8 7 9 9 12 8 15 15 12 12 14 21 21 29 21 19 9 9 19 24 35 36 37 37 37 36
31 31 31 31 47 48 53 50 50 50 50 42 41 27 27 9 9 12 14 12 12 8 8 8 8 13 11 11 11 11 12 25 27 36 47 50 53 59 53 38 42 42 42 38 38 50 57 57 53 47
44 44 39 37 23 17 10 10 11 11 11 16 15 15 19 24 30 28 35 22 23 12 11 11 11 12 20 28 37 46 47 59 48 48 48 36 36 36 50 50 50 57 57 57 57 57 57 57 57 48
48 48 50 50 53 53 53 48 48 47 57 57 54 50 48 50 50 68 68 68 68 68 68 68 50 50 51 50 50 50 68 68 44 43 35 37 36 48 48 68 68 68 68 57 57 57 68 57 57 57
68 68 68 68 68 68 68 50 50 50 50 50 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 54 54 59 59 52 52 57 59 59 59 57 57 57 57 57 57 59 59 68 68 68
68 68 68 68 68 68 57 57 52 52 57 57 57 68 68 68 68 68 57 57 57 57 57 57 57 52 45 45 52 59 59 68 68 68 68 68 68 68 68 68 68 57 59 44 44 35 28 20 38 38
68 68 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 41 38 17 17 34 41 59 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 52 52 62 62 62
62 62 62 43 62 62 62 62 62 52 62 52 62 62 62 62 44 44 39 39 43 43 62 62 62 62 62 62 62 62 68 44 44 31 31 31 44 44 68 68 68 68 68 68 44 38 26 13 12 13
10 8 8 8 8 11 32 38 44 62 68 62 62 62 52 43 43 23 31 31 44 43 52 52 38 38 17 17 20 43 43 52 57 57 43 43 26 26 26 43 43 57 52 52 52 52 57 57 52 57
57 57 52 52 52 52 57 52 52 43 43 33 33 43 44 57 57 57 52 52 52 59 59 59 59 43 43 33 31 31 33 38 43 50 59 44 59 52 52 52 52 57 57 57 57 57 57 52 52 52
44 44 52 50 48 38 32 12 12 12 32 32 59 44 44 33 35 35 44 44 57 57 57 57 59 59 59 57 54 46 59 46 54 54 57 59 57 43 43 32 34 20 20 20 34 34 30 30 24 35
28 28 20 34 34 54 47 59 47 43 43 40 40 24 27 17 20 20 37 37 59 59 59 59 57 57 48 59 43 59 59 59 47 47 59 59 59 59 59 59 59 59 59 46 41 43 18 12 7 8
8 9 15 37 59 59 59 47 43 43 37 37 43 59 59 57 57 57 46 43 43 34 35 48 48 48 57 43 57 48 42 42 35 26 28 28 28 43 42 42 54 48 48 43 43 43 43 43 43 43
43 39 39 39 39 39 39 39 35 35 31 27 25 13 13 15 18 21 28 25 29 29 41 37 37 36 27 25 27 28 28 30 39 34 33 30 30 30 37 23 30 28 32 32 43 34 30 24 24 28
30 30 47 59 47 41 43 43 39 31 32 20 20 23 23 28 37 34 37 28 18 16 21 13 13 10 11 11 15 22 13 14 17 18 19 16 12 11 11 11 9 9 11 15 13 15 15 10 10 10
17 10 19 11 15 15 23 18 18 11 11 11 12 9 11 8 8 8 8 8 8 9 9 9 14 9 9 9 13 10 9 9 9 12 8 8 8 12 12 10 9 9 9 9 16 12 11 11 11 11
11 10 11 11 11 14 15 23 9 9 9 9 9 9 9 11 11 12 10 10 10 15 15 15 15 16 15 10 10 10 10 10 10 11 10 11 21 22 19 13 12 9 9 8 8 8 12 8 9 11
11 11 11 10 10 10 10 11 20 19 25 19 19 13 11 8 8 9 12 10 10 11 11 13 12 19 14 15 15 11 11 9 14 11 11 11 11 11 11 11 11 11 11 10 16 16 11 11 9 8
9 7 7 8 6 9 9 8 8 8 8 6 6 8 8 8 8 8 8 12 8 8 8 12 8 8 12 8 8 8 8 8 8 12 13 9 13 11 11 9 8 8 8 10 8 10 15 10 10 10
12 17 12 10 9 9 9 8 8 8 8 8 8 14 12 12 10 10 10 11 11 10 10 8 8 8 11 13 15 8 8 8 8 8 7 6 6 6 10 8 8 10 10 8 10 11 8 8 8 8
6 8 6 6 8 8 10 10 10 10 7 7 7 8 8 8 10 8 8 6 7 12 6 9 9 10 10 8 8 6 6 8 8 10 8 8 8 8 8 12 10 10 9 11 10 14 9 17 9 7
8 8 10 10 10 8 8 8 8 10 10 11 15 8 8 8 8 8 10 8 8 10 10 11 12 12 21 16 11 10 17 12 8 8 6 7 8 8 8 15 19 13 10 10 10 8 8 6 6 8
6 8 8 11 19 19 16 12 18 11 11 8 8 8 8 9 8 8 6 7 6 6 8 9 8 8 8 8 8 8 10 7 7 7 6 8 7 7 10 7 6 8 8 10 10 8 8 8 8 8
8 8 8 8 10 10 9 8 8 8 8 8 6 11 6 6 8 8 12 8 10 9 10 9 15 10 10 10 8 8 8 8 8 8 8 6 6 6 8 8 8 9 10 13 10 11 11 14 14 13
10 10 9 9 10 10 12 10 10 10 10 13 8 8 8 8 8 11 10 13 12 9 8 12 8 8 8 8 8 8 8 8 8 10 12 8 8 8 8 8 8 8 6 6 8 8 8 6 6 6
10 13 10 8 8 6 |
|---|
