Query= MSMg01no049_e07.b1 MSMg01no049_e07.b1 CHROMAT_FILE:
MSMg01no049_e07.b1 PHD_FILE: MSMg01no049_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:06 2005
(686 letters)
>mm_chr7_53779557_53780642
Length = 1086
Score = 1290 bits (667), Expect = 0.0
Identities = 683/691 (98%), Gaps = 5/691 (0%)
Strand = Plus / Plus
Query: 1 tggacctggggaagcaaagagcagccctgcacacccgaccaaaggttcaggcatgatggg 60
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 201 tggacctggggaagcaaagagcagccctgcacaccagaccaaaggttcaggcatgatggg 260
Query: 61 aaatcacagttccatccctacacatgtaggctgcttgagccagtatagaactacctagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatcacagttccatccctacacatgtaggctgcttgagccagtatagaactacctagac 320
Query: 121 gcagtcacccgtgcccccagcatcgacgacttctcttactctacagagctcagatcctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagtcacccgtgcccccagcatcgacgacttctcttactctacagagctcagatcctaa 380
Query: 181 atgcttttttaataagagaaatcagactccccaaagaaatggcagactccggggtcagaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgcttttttaataagagaaatcagactccccaaagaaatggcagactccggggtcagaa 440
Query: 241 caaggaaagaacaactggaaaccgagcacctgtttgttccaagaagtaaggtgacatagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caaggaaagaacaactggaaaccgagcacctgtttgttccaagaagtaaggtgacatagg 500
Query: 301 ggtcttataaagtcagggtgatgaggatatcataaaataacacaggagccaccttgaagg 360
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 ggtcttataaagtcagggtgatgaggatatcagaaaataacacaggagccaccttgaagg 560
Query: 361 ggtccctaccagctggggccagggggaatcggaacattaaaatgaataatggcagtattc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtccctaccagctggggccagggggaatcggaacattaaaatgaataatggcagtattc 620
Query: 421 acttaca-----ctgaataaaacaaaagtccatgaatacatactgggtaataaatatgga 475
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acttacaatacactgaataaaacaaaagtccatgaatacatactgggtaataaatatgga 680
Query: 476 agcagggaaggctcttcttatactgggatgtcataaataataaacataagaggaataatt 535
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcagggaaggctcttcttatactgggatgtcataaataataaacataagaggaataatt 740
Query: 536 gatttagaaaagttttacaaccattgcaataacagtgagtgcagggttgaattgtcaatt 595
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 741 gatttagaaaagttttacaaccattgtaataacagtgagtgcagggttgaattgtcaatt 800
Query: 596 ccccttaaaactggagatcaaaagtcctggatgagtggcaggctcacacagccccagcca 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ccccttaaaactggagatcaaaagtcctggatgagtggcaggctcacacagccccagcca 860
Query: 656 tctcctcacacatcactgtttagttgcacgg 686
|||||||||||||||||||||||||||||||
Sbjct: 861 tctcctcacacatcactgtttagttgcacgg 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 686
Length of database: 1086
Length adjustment: 10
Effective length of query: 676
Effective length of database: 1076
Effective search space: 727376
Effective search space used: 727376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no049_e07.g1 MSMg01no049_e07.g1 CHROMAT_FILE:
MSMg01no049_e07.g1 PHD_FILE: MSMg01no049_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:11:06 2005
(454 letters)
>mm_chr7_53814050_53814909
Length = 860
Score = 833 bits (431), Expect = 0.0
Identities = 451/461 (97%), Gaps = 8/461 (1%)
Strand = Plus / Minus
Query: 1 tatctttcc-aagtcacgtgggaagtccctttaagacagccagctggggtttctagttga 59
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tatctttccaaagtcacgtgggaagtccctttaagacagccagctggggtttctagttga 601
Query: 60 gcgaatccagagcaaagcagtgtctctcggagaaggcttccttctaaggaaacaaataga 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 gcgaatccagagcaaagcagtgtctctcggagaaggcttccttctaaggaaacaaataga 541
Query: 120 gatgacagcagcaaattggatggccgtgatatcttgcaagaactgacgggggaagttgag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gatgacagcagcaaattggatggccgtgatatcttgcaagaactgacgggggaagttgag 481
Query: 180 tcagtctc------tctctgtctctctccatggctgagagtctgggttgaacttcccatg 233
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tcagtctctctctgtctctgtctctctccatggctgagagtctgggttgaacttcccatg 421
Query: 234 gttgaacttggcactgttgccctcttcccgcgtgagataacagtaaagcctgctagaaat 293
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 420 gttgaacttggcactgttgccctcttcccttgtgagataacagtaaagcctgctagaaat 361
Query: 294 tattcactgcccagctgttctcaagccttgtgtcacagagctggggtctggtgggtggga 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tattcactgcccagctgttctcaagccttgtgtcacagagctggggtctggtgggtggga 301
Query: 354 tcaggccttctccagacaaggaccttggacgacacatggaagcaagcatgctggggtctg 413
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 300 tcaggccttctccagacaaggacc-tggacgacacatggaagcaagcatgctggggtctg 242
Query: 414 aaatgggggtgagtttgtcaactcacgataaggtagattgt 454
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaatgggggtgagtttgtcaactcacgataaggtagattgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 860
Length adjustment: 10
Effective length of query: 444
Effective length of database: 850
Effective search space: 377400
Effective search space used: 377400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
