Query= MSMg01no052_f05.b1 MSMg01no052_f05.b1 CHROMAT_FILE:
MSMg01no052_f05.b1 PHD_FILE: MSMg01no052_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:55 2005
(302 letters)
>mm_chr7_122459661_122460363
Length = 703
Score = 555 bits (287), Expect = e-162
Identities = 299/303 (98%), Gaps = 1/303 (0%)
Strand = Plus / Minus
Query: 1 tactcagttttggttcagtccctgaaagga-cagcatttgtggttccgttcagcatccca 59
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 503 tactcagttttggttcagtccctgaaaggagcagcatttgtggttccgttcagcatccca 444
Query: 60 ttctttaggcttctccttagaccatggtacccaggtccagtgtatctctccatgcctttc 119
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 443 ttctttaggcttctccttagaccatggtacccaggtccagtgtaactctccatgcctttc 384
Query: 120 ccttcccccaggtctgctgtggtttgctgctgaatgctccatttcttctaaaactgtaac 179
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ccttccccaaggtctgctgtggtttgctgctgaatgctccatttcttctaaaactgtaac 324
Query: 180 aggaatgagtcaagaaaggggatattttggacaatagaaaaacatgttgaaaattatgtt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aggaatgagtcaagaaaggggatattttggacaatagaaaaacatgttgaaaattatgtt 264
Query: 240 atatagacaaaattctgtagagtttcaccatcttgcagctagtaactgccttctgaacag 299
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 263 atatagacaaaattctgtagagtttcaccatcttggagctagtaactgccttctgaacag 204
Query: 300 aaa 302
|||
Sbjct: 203 aaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 302
Length of database: 703
Length adjustment: 9
Effective length of query: 293
Effective length of database: 694
Effective search space: 203342
Effective search space used: 203342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no052_f05.g1 MSMg01no052_f05.g1 CHROMAT_FILE:
MSMg01no052_f05.g1 PHD_FILE: MSMg01no052_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:52:55 2005
(115 letters)
>mm_chr7_122302058_122302572
Length = 515
Score = 215 bits (111), Expect = 8e-61
Identities = 114/115 (99%)
Strand = Plus / Plus
Query: 1 tagatggatcactgggatttggctttgaagatgatagacacttttggctcctacccaagc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tagatggatcactgggatttggctttgaagatgatagacacttttggttcctacccaagc 260
Query: 61 tttcagcttcctggttaccttaggaccaaatgtctctctctcccactactgagga 115
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttcagcttcctggttaccttaggaccaaatgtctctctctcccactactgagga 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 115
Length of database: 515
Length adjustment: 8
Effective length of query: 107
Effective length of database: 507
Effective search space: 54249
Effective search space used: 54249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
