Query= MSMg01no054_g17.b1 MSMg01no054_g17.b1 CHROMAT_FILE:
MSMg01no054_g17.b1 PHD_FILE: MSMg01no054_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:36 2005
(269 letters)
>mm_chr7_103381079_103381747
Length = 669
Score = 296 bits (153), Expect = 9e-85
Identities = 217/269 (80%), Gaps = 50/269 (18%)
Strand = Plus / Plus
Query: 1 caatacacagaatccaggtttgttatgcccattcccagcttatcttataggaaacatcta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 251 caatacacagaatccaggtttgttatgcccattcccagcttatcttataggaaaca--ta 308
Query: 61 tatatatacacgtatatacatacatacatacatatatatatatatatatatatatatata 120
||||||| |||||||||||||||
Sbjct: 309 tatatat--------------------atacatatatatata------------------ 330
Query: 121 tatgtatgtatataataaaggcttaactttttttaatgttatcaggaaggagaaaagttt 180
| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 ---------a-agaataaaggcttaactttttttaatgttatcaggaaggagaaaagttt 380
Query: 181 tactaggttttcgggaagatttgtgctggtataggagctaaaaggcaaagataagctttt 240
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 tactaggttttcgggaagatttgtgctggtaaaggagctaaaaggcaaagataagctttt 440
Query: 241 aaaatacacgtgaaacaacgagaacataa 269
|||||||||||||||||||||||||||||
Sbjct: 441 aaaatacacgtgaaacaacgagaacataa 469
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 269
Length of database: 669
Length adjustment: 9
Effective length of query: 260
Effective length of database: 660
Effective search space: 171600
Effective search space used: 171600
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no054_g17.g1 MSMg01no054_g17.g1 CHROMAT_FILE:
MSMg01no054_g17.g1 PHD_FILE: MSMg01no054_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:55:36 2005
(536 letters)
>mm_chr7_103511793_103512728
Length = 936
Score = 1013 bits (524), Expect = 0.0
Identities = 533/536 (99%)
Strand = Plus / Minus
Query: 1 gattgagagcatttacctagagcacggtatttgggaaagttctgagacttcactgaaaca 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 736 gattgagagcatttacctagagcacagtatttgggaaagttctgagacttcactgaaaca 677
Query: 61 cagtagtaaagaccgtagtgttaaccagaggtgcctaccgagggctggcaggcaagaatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 cagtagtaaagaccgtagtgttaaccagaggtgcctaccgagggctggcaggcaagaatg 617
Query: 121 gcagctgcctgctgtgtacacggaaccaagatttgcttttccagctgcagggacagctac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 gcagctgcctgctgtgtacacggaaccaagatttgcttttccagctgcagggacagctac 557
Query: 181 tgttggctcctcagttgagctctgttctagaaatggccttcagctcaagagagtggccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tgttggctcctcagttgagctctgttctagaaatggccttcagctcaagagagtggccac 497
Query: 241 ctgcaggcagctgcagctgtcactactgtggccgtaaagaagttaaactgcactagatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 ctgcaggcagctgcagctgtcactactgtggccgtaaagaagttaaactgcactagatgc 437
Query: 301 gatgggggggatatcagagggagcatctcaggctcacaattggcagtggagtcaactgaa 360
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 436 gatgggggggatatcagagggagcatctcaggctcatgattggcagtggagtcaactgaa 377
Query: 361 gaaccgctatgactgtagtgcagttcaccaccaccacccctccctccaccttgtcctggc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gaaccgctatgactgtagtgcagttcaccaccaccacccctccctccaccttgtcctggc 317
Query: 421 tcctagtctcactctcagaggttgggtacaggaacacccctatcaactttccacaaggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tcctagtctcactctcagaggttgggtacaggaacacccctatcaactttccacaaggaa 257
Query: 481 atctgtcccagacccagtcaggctagccacactcaatccatcatgaactgccatcc 536
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atctgtcccagacccagtcaggctagccacactcaatccatcatgaactgccatcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 536
Length of database: 936
Length adjustment: 10
Effective length of query: 526
Effective length of database: 926
Effective search space: 487076
Effective search space used: 487076
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
