Query= MSMg01no059_g12.b1 MSMg01no059_g12.b1 CHROMAT_FILE:
MSMg01no059_g12.b1 PHD_FILE: MSMg01no059_g12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:54 2005
(481 letters)
>mm_chr7_72765957_72766840
Length = 884
Score = 841 bits (435), Expect = 0.0
Identities = 470/483 (97%), Gaps = 5/483 (1%)
Strand = Plus / Plus
Query: 3 gaattccttccggtcaca--tttattttctctgtgctggttgttatccggtgtccctccg 60
||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattccttccgggca-agctttattttctctgtgctggttgttatccggtgtccctccg 261
Query: 61 ggttgtgtttgtggccagtgacaggatattagccaactgctatcgcagaaggggagctgt 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggatgtgtttgtggccagtgacaggatattagccaactgctatcgcagaaggggagctgt 321
Query: 121 tagctcatggaacactctgagtagaccgagacccgaagacaggcagtcccttccctgaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tagctcatggaacactctgagtagaccgagacccgaagacaggcagtcccttccctgaca 381
Query: 181 cacaccctgcatctaccttttggggctggctaggggcctttctgctgcttctttcttagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 cacaccctgcatctaccttttggggctggctaggggcctttctgctgcttctttcttagt 441
Query: 241 aaatcgattttttttt--ctgcaaatgcccacacagctgcatcaggtctgcactgtgtgt 298
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aaatcgatttttttttttctgcaaatgcccacacagctgcatcaggtctgcactgtgtgt 501
Query: 299 tttctgtttagcctcagctgccaccctgagaagcccttcaccagcatcagagctgctctt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 502 tttctgtttagcctcagctgccaccctgagaagcccttcaccagcatcagagccgctctt 561
Query: 359 gacacgggcccgccttgaagtcttcatttcctctgccttggtttgtctctcgttgggcaa 418
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 gacacgggcttggtttgaagtcttcatttcctctgccttggtttgtctctcgttgggcaa 621
Query: 419 ggcacccccatcatttacttcctgatagaagatgccttgcataaaatgttttggaacttc 478
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ggcacccccatcattcacttcctgatagaagatgccttgcataaaatgttttggaacttc 681
Query: 479 aaa 481
|||
Sbjct: 682 aaa 684
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 884
Length adjustment: 10
Effective length of query: 471
Effective length of database: 874
Effective search space: 411654
Effective search space used: 411654
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_g12.g1 MSMg01no059_g12.g1 CHROMAT_FILE:
MSMg01no059_g12.g1 PHD_FILE: MSMg01no059_g12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:54 2005
(480 letters)
>mm_chr7_72927290_72928169
Length = 880
Score = 772 bits (399), Expect = 0.0
Identities = 417/425 (98%), Gaps = 4/425 (0%)
Strand = Plus / Minus
Query: 56 cctgggttatgacttgtttgcttaattagttagttaatacatgtagcatttgtgtgaggc 115
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 cctgggttatgacttatttgcttaattagttagttaatacatgtagcatttgtgtgag-- 823
Query: 116 gtgcgtgcgtgtacctgatggtcagaggtcaactagtgggaactggttctctcctattgt 175
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 822 --gcgtgcgtgtacctgatggtcagaggtcaactagtggaaactggttctctcctattgt 765
Query: 176 gtgggtcctgaaacagagctgaggtcatcggccttatcagacttagatgcaggctcttta 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 gtgggtcctgaaacagagctgaggtcatcggccttatcagacttagatgcaggctcttta 705
Query: 236 cctgctgagccacctcattggcccaggccctgggttctaactgtgactgcagtctcctca 295
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 cctgctgagccacctcactggcccaggccctgggttctaactgtgactgcagtctcctca 645
Query: 296 caacccaactcattttgtccttaacttgcctgaggatggaaggctccctccaaaaccttc 355
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 caacccaactcattttgtccttaacttgcctgaggatggaaggctccctccaaaaccttc 585
Query: 356 cccacaacccagtcgccccaaagagggaactctttggcccacatttgcacctaaaaagta 415
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 cccacaacccagtcgccccaaagagggaactctttggcccacatttgcacctaaaaagta 525
Query: 416 tcatggtggggttagcaatttgggcaactccctggttttgtgatttctgtctgagcccac 475
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 tcatggtggggctagcaatttgggcaactccctggttttgtgatttctgtctgagcccac 465
Query: 476 catag 480
|||||
Sbjct: 464 catag 460
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
