Query= MSMg01no059_j08.b1 MSMg01no059_j08.b1 CHROMAT_FILE:
MSMg01no059_j08.b1 PHD_FILE: MSMg01no059_j08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:07 2005
(435 letters)
>mm_chr7_76932620_76933456
Length = 837
Score = 814 bits (421), Expect = 0.0
Identities = 433/437 (99%), Gaps = 2/437 (0%)
Strand = Plus / Plus
Query: 1 aaatttccttcctttttaagtacaagccacctttggattccaggtttcaaattttaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaatttccttcctttttaagtacaagccacctttggattccaggtttcaaattttaggca 260
Query: 61 tccatccaaaaaattggttataagcacttccagggactcttgccagcatacagaaactgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccatccaaaaaattggttataagcacttccagggactcttgccagcatacagaaactgt 320
Query: 121 atcaattaaatcagccaaagcagaaggaatgatcataactcattttacaagtaagttcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcaattaaatcagccaaagcagaaggaatgatcataactcattttacaagtaagttcag 380
Query: 181 atatcttcagatacatatatctcaggtttgggtcaaaaa-ttactaagacatgtacacgt 239
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 atatcttcagatacatatatctcaggtttgggtcaaaaaattactaagacatgtacacgt 440
Query: 240 taatgttttaatcatacatatgttttaattgtaaaatcatccccactattgtaccatgta 299
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 taatgttttaatcatacatatgttttaagtgtaaaatcatccccactattgtaccatgta 500
Query: 300 tattttgcaatatactgctagttatgttctttgggggagactgtaaggttt-aggaaaac 358
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 tattttgcaatatactgctagttatgttctttgggggagactgtaaggttttaggaaaac 560
Query: 359 tcccagtatatgaaaagaatgaagatcaccttttaagggaaattcttcaaagacctgcca 418
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcccagtatatgaaaagagtgaagatcaccttttaagggaaattcttcaaagacctgcca 620
Query: 419 aatgagctttcacacaa 435
|||||||||||||||||
Sbjct: 621 aatgagctttcacacaa 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 837
Length adjustment: 9
Effective length of query: 426
Effective length of database: 828
Effective search space: 352728
Effective search space used: 352728
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no059_j08.g1 MSMg01no059_j08.g1 CHROMAT_FILE:
MSMg01no059_j08.g1 PHD_FILE: MSMg01no059_j08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:02:07 2005
(294 letters)
>mm_chr7_77093789_77094482
Length = 694
Score = 553 bits (286), Expect = e-162
Identities = 292/294 (99%)
Strand = Plus / Minus
Query: 1 tctttatggagatttctgtttctttaggttattttggccaggctcttcagagagcggcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 tctttatggagatttctgtttctttaggttattttggccaggctcttcagagagcggcac 435
Query: 61 cgaggcaagatcactcaggttccagccatggtctatggcatacagacccatacaagctag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 cgaggcaagatcactcaggttccagccatggtctatggcatacagacccatacaagctag 375
Query: 121 ctctggtcatgcatgtcctgaccaaagaaacatcactgtcccactggttaaataatgtaa 180
|||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||
Sbjct: 374 ctctggtcatgcatgtcctgaccaaacaaacatcactgtcccactgattaaataatgtaa 315
Query: 181 ctttaaatgacaatggtgagtggacatctttaaatggggtgggtcccaaatttactgtga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ctttaaatgacaatggtgagtggacatctttaaatggggtgggtcccaaatttactgtga 255
Query: 241 atcctagtatgctattattgaatatattactgggttgggttttttgtttgtttg 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atcctagtatgctattattgaatatattactgggttgggttttttgtttgtttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
