Query= MSMg01no060_h10.b1 MSMg01no060_h10.b1 CHROMAT_FILE:
MSMg01no060_h10.b1 PHD_FILE: MSMg01no060_h10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:12 2005
(328 letters)
>mm_chr7_59321181_59321908
Length = 728
Score = 559 bits (289), Expect = e-164
Identities = 316/325 (97%), Gaps = 2/325 (0%)
Strand = Plus / Plus
Query: 1 aattcaattatctgtttagattctacatgctctatctttttgaaggtggccagtgtttgc 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcaattttctgtttagattctacatgctctatctttttgaaggtggccagtgtttgc 260
Query: 61 tgcaggatgcatgatgtctaacctttattagtgtgaagactcatgattgtataaacatta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgcaggatgcatgatgtctaacctttattagtgtgaagactcatgattgtataaacatta 320
Query: 121 ccaaagtacccagatgtccctttcatctgtatctactgtttcttttcctagagtggcatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccaaagtacccagatgtccctttcatctgtatctactgtttcttttcctagagtggcatt 380
Query: 181 gatttctctttctcattgctttttcttcctcggcacaaatgtctgtccctctgcacagat 240
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 gatttctctttctcatggctttttcttcctctgcacaaatgtctgtccctctgcacagat 440
Query: 241 gctggtctctccctctc-tccctcccccatccttcccctgtccctctcttctctctcctc 299
||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 441 gctggtctctccctc-catccctcccccatccttctcctgtccctctcttctctctcatc 499
Query: 300 cttcttttctttcttcggtctttca 324
||||||||||||||| |||| ||||
Sbjct: 500 cttcttttctttctttggtccttca 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 728
Length adjustment: 9
Effective length of query: 319
Effective length of database: 719
Effective search space: 229361
Effective search space used: 229361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no060_h10.g1 MSMg01no060_h10.g1 CHROMAT_FILE:
MSMg01no060_h10.g1 PHD_FILE: MSMg01no060_h10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:03:12 2005
(461 letters)
>mm_chr7_59412772_59413632
Length = 861
Score = 837 bits (433), Expect = 0.0
Identities = 454/461 (98%)
Strand = Plus / Minus
Query: 1 atagccactcaaggtctcccagcctccagattaggatcactggtgagccttccaattatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 775 atagccactcaaggtctcccagcctccagattaggatcactggtgagccttccaattctg 716
Query: 61 gattgtagttcatttcaaatatagtcaagttgacaaccaggaatagccactacactcagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 gattgtagttcatttcaaatatagtcaagttgacaaccaggaatagccactacactcagc 656
Query: 121 catcacatttcctactatccaaccatcaaaacagatgttatctttccttgtggtgaatat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 catcacatttcctactatccaaccatcaaaacagatgttatctttccttgtggtgaatat 596
Query: 181 tcatatccttaagtacccacactctggtatctttgttatttggaataagttctcttctga 240
|||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||
Sbjct: 595 tcatatccttaagtacccacactctggtgtctttgttacttggaataggttctcttctga 536
Query: 241 cttctgcttactacacatcttcccagcctccagatatgttcatatgtctaggaactcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 cttctgcttactacacatcttcccagcctccagatatgttcatatgtctaggaactcatt 476
Query: 301 ccttccttcttttccattgagatcttcagaataggctttgattaagctgtctatggagcc 360
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 cctaccttcttttccattgagatcttcagaataggctttgattaagctgtctatggagcc 416
Query: 361 attctaattaaagccactctgtagcaaggtcactccactccattcatatgccagggagaa 420
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 attctaattaaagccattctgtagcaaggtcactccactccattcatatgccagggagaa 356
Query: 421 tgccagaatgatgctgtttgatttctatatttctgcagcat 461
|||||||||||||||||||||||||| ||||||||||||||
Sbjct: 355 tgccagaatgatgctgtttgatttctgtatttctgcagcat 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
