Query= MSMg01no061_e10.b1 MSMg01no061_e10.b1 CHROMAT_FILE:
MSMg01no061_e10.b1 PHD_FILE: MSMg01no061_e10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:12 2005
(482 letters)
>mm_chr7_30635091_30635975
Length = 885
Score = 824 bits (426), Expect = 0.0
Identities = 467/486 (96%), Gaps = 11/486 (2%)
Strand = Plus / Minus
Query: 4 ggaattcactttggtccggcacttggtgatgcctttggtagaagttatgggacattgaat 63
||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 544 ggaattcactttggtgtggcacttggtgatgcctttggtagaaattatgggacattgaat 485
Query: 64 gcatagggattaagatgttgcatttatctgtctgtaacatgaagaataagcaagaacaca 123
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gcatagggattaagatgttacatttatctgtctgtaacatgaagaataagcaagaacaca 425
Query: 124 gaaagaacgatatctgtattgtaaagaaggcttatcagaaaaggctttgctcaactctgt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 gaaagaacgatatctgtattgtaaagaaggcttatcagaaaaggctttgctcaactctgt 365
Query: 184 aagtcacatctctgtcatgagtcttttgacaattaaagctggttcagagacagtgaagtg 243
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 364 aagtcacatctctgtcatgagccttttgacaattaaagctggttcagagacagtgaagtg 305
Query: 244 tggctattg---ttattattattaggctattattgacacgtggaacatgtgctgattgga 300
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 304 tggctattgttattattattattaggctattattgacatgtggaacatgtgctgattgga 245
Query: 301 aggtactcagtatgaagtattaaggagtggatttcttaaggaattattataattaattta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aggtactcagtatgaagtattaaggagtggatttcttaaggaattattataattaattta 185
Query: 361 atttaatttaa----ccccgccaattggaagtatttattccagacctaagtgtagcaaca 416
||||||||||| |||||||||||||||||||||||||||||||||||||| ||
Sbjct: 184 atttaatttaatttt----gccaattggaagtatttattccagacctaagtgtagcacca 129
Query: 417 ggtgtctagagcacaggggttttgaaggcagagaccatgtcccagtgtctcactcagcag 476
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 agtgtctagagcacaggggttttgaaggcagagaccatgtcccagtgtctcactcagcag 69
Query: 477 ctgcgg 482
||||||
Sbjct: 68 ctgcgg 63
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 885
Length adjustment: 10
Effective length of query: 472
Effective length of database: 875
Effective search space: 413000
Effective search space used: 413000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_e10.g1 MSMg01no061_e10.g1 CHROMAT_FILE:
MSMg01no061_e10.g1 PHD_FILE: MSMg01no061_e10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:12 2005
(614 letters)
>mm_chr7_30508843_30509856
Length = 1014
Score = 1060 bits (548), Expect = 0.0
Identities = 598/616 (97%), Gaps = 4/616 (0%)
Strand = Plus / Plus
Query: 1 aaggccagcccgggtcaagtaacactatcctatatcatgaaaggaagagtgcggggccag 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 aaggccagcccgggtcaagtaacactatcctatatcctgaaaggaagagtgcggggccag 260
Query: 61 agagattggctgactcaatggttagagtgtgtaactgttcttctagatgaccaaagcatg 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 261 agagattggctgactcaatggttagagtgtttaactgttcttctagatgaccaaagcatg 320
Query: 121 attgccagcatctatgtcaagccacaatagcttgtaactccaatcccaggaattcatcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgccagcatctatgtcaagccacaatagcttgtaactccaatcccaggaattcatcac 380
Query: 181 cctcttccgacctccataggcaactgcatgcacatgcatagacctattaaaaataagatg 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 cctcttccgacctccataggcaactgcatgcacatgtatagacctattaaaaataagatg 440
Query: 241 attgctttttttaaaagagagaataactactattagacacagggttcttattggaggata 300
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 aatgctttttttaaaagagagaataactattattagacacagggttcttattggaggata 500
Query: 301 ataggaacgttccggggaaagataatgaggttagtgtgattgcctgagtgaggtactgtt 360
|||||||| |||| |||||||||||||||||||||||||||| ||||||||||| ||||
Sbjct: 501 ataggaacattccagggaaagataatgaggttagtgtgattgtttgagtgaggtattgtt 560
Query: 361 tgaacacccc--aggctcctatgtttgaatgcttggtccttagctgtgggtctgactgaa 418
||| | ||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgagc--cccttaggctcctatgtttgaatgcttggtccttagctgtgggtctgactgaa 618
Query: 419 taggattacatatggccttcatggaggagatgtgtcaccaggggtggtaggccttgaggt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 taggattacatatggccttcatggaggagatgtgtcaccaggggtggtaggccttgaggt 678
Query: 479 ctgcaccattcctagttcgctttctctgcttcctgcttgtggatggaagtacctgccatg 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ctgcaccattcctagttcgctttctctgcttcctgcttgtggatggaagtacctgccatg 738
Query: 539 gcggtcccaccgggttccctactgtgctgctcttgtacttttggtttataagttgccttg 598
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 739 gtggtcccaccgggttccctactgtgctgctcttggacttttggtttataagttgccttg 798
Query: 599 gccacgatgtttctgt 614
| ||||||||||||||
Sbjct: 799 gtcacgatgtttctgt 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
