Query= MSMg01no061_l15.b1 MSMg01no061_l15.b1 CHROMAT_FILE:
MSMg01no061_l15.b1 PHD_FILE: MSMg01no061_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:47 2005
(383 letters)
>mm_chr7_121279973_121280750
Length = 778
Score = 698 bits (361), Expect = 0.0
Identities = 376/383 (98%), Gaps = 5/383 (1%)
Strand = Plus / Plus
Query: 1 atcccataaacagagggaaatactgtgatggcgatggcgtggagccgggcccaccagtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcccataaacagagggaaatactgtgatggcgatggcgtggagccgggcccaccagtcc 260
Query: 61 gtcattttatctcataacaggtgcaaaactccaagctgtctgtagggcttcagcccagtg 120
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 gtcattttatctcataacaggtgcaaaactccaagctgt----agggcttcagcccagtg 316
Query: 121 cagtccccacttcttggcctgttcccattgtcatagacctctgtcaggaactggctctgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 317 cagtccccacttcttggcctgttcccattgtcatagacctctgtcaggaactg-ctctgc 375
Query: 181 cctttacaatgacttgccttgtacgagcttccaaagctaggggttctgtgcacccctagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 cctttacaatgacttgccttgtacgagcttccaaagctaggggttctgtgcacccctagc 435
Query: 241 agtcctgaaatggtgttcattaatacctaaccactgctcgatctctgcctctgtcttcag 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 agtcctgaaatggggttcattaatacctaaccactgctcgatctctgcctctgtcttcag 495
Query: 301 taggacctctcatactctgtggtctctttcatccttttgcaaccactctgttttacacac 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 496 taggacctctcatactctgtggtctctttcatccttttgcaaccattctgttttacacac 555
Query: 361 acacacacacacacacacacaca 383
|||||||||||||||||||||||
Sbjct: 556 acacacacacacacacacacaca 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 778
Length adjustment: 9
Effective length of query: 374
Effective length of database: 769
Effective search space: 287606
Effective search space used: 287606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no061_l15.g1 MSMg01no061_l15.g1 CHROMAT_FILE:
MSMg01no061_l15.g1 PHD_FILE: MSMg01no061_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:47 2005
(303 letters)
>mm_chr7_121359424_121360122
Length = 699
Score = 534 bits (276), Expect = e-156
Identities = 295/302 (97%), Gaps = 4/302 (1%)
Strand = Plus / Minus
Query: 1 catgtctgttttatttctgtggtataatttcttctgtcataattatgttttgtgcataag 60
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 catgtctgtcttatttctgtggtataatttcttctgtcataattatgttttgtgcataag 439
Query: 61 acatacatacatacatatgcatggtattttctgaacttttaattcatttaaaatggctta 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 438 acatacatacatacatatgcatggtattttctgaac-tttaattcatttaaaatggctta 380
Query: 121 ttctacaatactgcctaaaacattgattcctgtgtgatatttgtgaaacagattttgtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ttctacaatactgcctaaaacattgattcctgtgtgatatttgtgaaacagattttgtag 320
Query: 181 agttttttgaagatatggcataaatcaagcactaaccaacataactaaaatcaacccagt 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 319 agttttttgaagatatggcataagtcaagcactaaccaacataactaaaatcaacccagt 260
Query: 241 ataagtttttatagtctgttttatatatcctttgctttgttgtttgacaatgtgatgtca 300
||||||||||| |||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 259 ataagtttttagagtctgttttatatatcctttgctttgttg-ttg--aatgtgatgtca 203
Query: 301 tc 302
||
Sbjct: 202 tc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 303
Length of database: 699
Length adjustment: 9
Effective length of query: 294
Effective length of database: 690
Effective search space: 202860
Effective search space used: 202860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
