Query= MSMg01no062_i08.b1 MSMg01no062_i08.b1 CHROMAT_FILE:
MSMg01no062_i08.b1 PHD_FILE: MSMg01no062_i08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:12 2005
(503 letters)
>mm_chr7_136017865_136018765
Length = 901
Score = 799 bits (413), Expect = 0.0
Identities = 480/507 (94%), Gaps = 10/507 (1%)
Strand = Plus / Plus
Query: 1 cttgaggtttctgctgggttgagccacccttactgattcatgttcccc----gtttgcta 56
|||||||||||||||||||||||| || ||||||||||||||| ||||||||
Sbjct: 201 cttgaggtttctgctgggttgagctactgttactgattcatgtt----tggtgtttgcta 256
Query: 57 ttggactcttctgctgatatcctgacaatgatagataggtccacaatccccttttcctat 116
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 257 ttggactcttctgctgatatcctgacaatggtagataggtccacaatccccttttcctat 316
Query: 117 taatcttagttttctgctacctctggttggcaggttagagggaggttaaagtgtttaaga 176
||||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||
Sbjct: 317 taatcttagttttctgctacctctggttgacaggctagagggaagttaaagtgtttaaga 376
Query: 177 gccttaattaaagtagattttgaaaaatctaagcctacaggaaagaggtgagagtagact 236
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 377 accttaattaaagtagattttgaaaaatctaagcctacaggaaagaggtgagagtggact 436
Query: 237 ggtggtccagacacagaggcacacagagacctggtggtatggatgggaacttcagtgttt 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ggtggtccagacacagaggcacacagagacctggtggtatggatgggaacttcagtgttt 496
Query: 297 gagtctctgccaattatttttctctctttatcaagcatttctagagatatctatgatggg 356
|||||| ||||||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 497 gagtct--gccaattataagtctctctttaccaagcatttctagagatatctatgatggg 554
Query: 357 gcacaggttgatcaaaacatacatttataatatgacttattttaaacctcaaggagatct 416
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 555 gcacaggttgatcaaaacatacatttataataggacttattctaaacctcaaggagatct 614
Query: 417 gttggactgctgaatggtttcctttacccagccgttatgatggttccatgtccatggtga 476
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 615 gttggactgctgaatggtttcctttacccagctgttatgatggttccatgtccatggtga 674
Query: 477 tgaggggtgagatcggatagcatgcca 503
||||||||||||||||| |||||||||
Sbjct: 675 tgaggggtgagatcggagagcatgcca 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 503
Length of database: 901
Length adjustment: 10
Effective length of query: 493
Effective length of database: 891
Effective search space: 439263
Effective search space used: 439263
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no062_i08.g1 MSMg01no062_i08.g1 CHROMAT_FILE:
MSMg01no062_i08.g1 PHD_FILE: MSMg01no062_i08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:06:12 2005
(621 letters)
>mm_chr7_136167252_136168272
Length = 1021
Score = 516 bits (267), Expect = e-150
Identities = 291/299 (97%)
Strand = Plus / Minus
Query: 1 tgtgcgattttggtaggtcagtgtagaaccctcagggagagaaagctcccaggggagccc 60
||||||||||||||||||||||||||||| |||||||||||||||| |||| |||||
Sbjct: 493 tgtgcgattttggtaggtcagtgtagaacagtcagggagagaaagctgatagggaagccc 434
Query: 61 tgtgaggcaccgtatgagctgtgactcagtctcttagtcaatggttcgtctcatgcaggc 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 433 tgtgaggcaccgtatgagctgtgactcggtctcttagtcaatggttcgtctcatgcaggc 374
Query: 121 ctgggaaggagcaagggattccagtctacaccaagaatcagagtctgctccatcctcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 ctgggaaggagcaagggattccagtctacaccaagaatcagagtctgctccatcctcaat 314
Query: 181 gccaaagatagaggaaaggcaagggaccaagagaatctgcttggtacaatagaccacgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gccaaagatagaggaaaggcaagggaccaagagaatctgcttggtacaatagaccacgca 254
Query: 241 aaatttgacttccacataagaaaactcttaacataaaaagtagtaattagatactgggc 299
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 253 aaatttgacttccacataagaaaactcttaacatgaaaagtagtaattagatactgggc 195
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
