Query= MSMg01no063_c21.b1 MSMg01no063_c21.b1 CHROMAT_FILE:
MSMg01no063_c21.b1 PHD_FILE: MSMg01no063_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:26 2005
(315 letters)
>mm_chr7_75851189_75851903
Length = 715
Score = 594 bits (307), Expect = e-174
Identities = 310/311 (99%)
Strand = Plus / Minus
Query: 5 gaattcaacatctgacattcaactcatcaacatggcgtcattcagatggtagccaagggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gaattcaacatctgacattcaactcatcaacatggcgtcattcagatggtagccaagggc 456
Query: 65 aaccatattgaaccatattggccattctcaatcagcagctcctattgggttttccttgaa 124
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 455 aaccatattgaaccatattggccattctcaatcagcagctcctattgggtttcccttgaa 396
Query: 125 acttccaaccaattagggcagataaaaagataccactggacaatctctgtttcacaggcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 acttccaaccaattagggcagataaaaagataccactggacaatctctgtttcacaggcc 336
Query: 185 tatctgcccaaactttgcaattcccagactctgtttggcctttgtatctgtaattctagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 tatctgcccaaactttgcaattcccagactctgtttggcctttgtatctgtaattctagg 276
Query: 245 gaagaagtttctttaaaaaaaaatggaaaaagtttctaaacaaataaaagtggttatata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 gaagaagtttctttaaaaaaaaatggaaaaagtttctaaacaaataaaagtggttatata 216
Query: 305 ttattccaaaa 315
|||||||||||
Sbjct: 215 ttattccaaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_c21.g1 MSMg01no063_c21.g1 CHROMAT_FILE:
MSMg01no063_c21.g1 PHD_FILE: MSMg01no063_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:26 2005
(292 letters)
>mm_chr7_75716296_75716989
Length = 694
Score = 534 bits (276), Expect = e-156
Identities = 289/294 (98%), Gaps = 2/294 (0%)
Strand = Plus / Plus
Query: 1 tgctgcagcttagcaagctaacagaaatcacacacagtatttccatcctactggagaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgctgcagcttagcaagctaacagaaatcacacacagtatttccatcctactggagaaat 260
Query: 61 gagacaggcccacagacctcaactctaagtcacctgtgaccgaagataatgttgggacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagacaggcccacagacctcaactctaagtcacctgtgaccgaagataatgttgggacat 320
Query: 121 tggagttggccaaataaatactcatggcttttgtttgaagtaaaaccaatctccaagccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggagttggccaaataaatactcatggcttttgtttgaagtaaaaccaatctccaagccc 380
Query: 181 tggctgtgttagccaacagtgctctggcacagagtctgcagaccttgtctgggggcggag 240
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 381 tggctgtgttagtcaacagtgctctggcacagagtctgcagaccttgtctgggggcgggg 440
Query: 241 g--gggtggggagaggaataggtcatcgagggaagtggcctgtttacctacctt 292
| |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggggtggggggaggaataggtcatcgagggaagtggcctgtttacctacctt 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 694
Length adjustment: 9
Effective length of query: 283
Effective length of database: 685
Effective search space: 193855
Effective search space used: 193855
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
