Query= MSMg01no063_f02.b1 MSMg01no063_f02.b1 CHROMAT_FILE:
MSMg01no063_f02.b1 PHD_FILE: MSMg01no063_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:37 2005
(317 letters)
>mm_chr7_104748054_104748770
Length = 717
Score = 576 bits (298), Expect = e-169
Identities = 310/314 (98%), Gaps = 2/314 (0%)
Strand = Plus / Minus
Query: 5 gaattctcttctctctttcgatgaggactgagcagagagtac-aaaaaaaagctaacttt 63
||||||||||| || ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 517 gaattctcttcact-tttcgatgaggactgagcagagagtacaaaaaaaaagctaacttt 459
Query: 64 acaaccaagacaacctaaaacaggacaggaaaacaaaattaatgtcttaatttctccctg 123
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 acaaccaagacaagctaaaacaggacaggaaaacaaaattaatgtcttaatttctccctg 399
Query: 124 gcctcatgagccaggtacttccagtgcaatttcagcagtatcaaaatatttatctaatta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 gcctcatgagccaggtacttccagtgcaatttcagcagtatcaaaatatttatctaatta 339
Query: 184 tgcactaccaatctatttaaaactctagaaagagaagcagcactggacagttctcaaata 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 tgcactaccaatctatttaaaactctagaaagagaagcagcactggacagttctcaaata 279
Query: 244 ttatcaagtatcaaaaaaggcaagaaacaactacagctatttgaatcgagactaaaagag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 ttatcaagtatcaaaaaaggcaagaaacaactacagctatttgaatcgagactaaaagag 219
Query: 304 gcatctgtgtatca 317
||||||||||||||
Sbjct: 218 gcatctgtgtatca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_f02.g1 MSMg01no063_f02.g1 CHROMAT_FILE:
MSMg01no063_f02.g1 PHD_FILE: MSMg01no063_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:38 2005
(226 letters)
>mm_chr7_104657108_104657733
Length = 626
Score = 410 bits (212), Expect = e-119
Identities = 221/224 (98%)
Strand = Plus / Plus
Query: 1 agagatctccctgcctcggcctcctcagtgctgggattgaagatgtccatcaccacacct 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 agagatctccctgcctcggcctcctcagtgctgggattgaagatgtgcatcaccacacct 260
Query: 61 gtccagtcattccttgcaagcttttctggttccacataagctttatgatgctggagtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtccagtcattccttgcaagcttttctggttccacataagctttatgatgctggagtttt 320
Query: 121 tctacggtgtccctctgaaccccttccccattatgtgtatcttcccgtttcgctctttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctacggtgtccctctgaaccccttccccattatgtgtatcttcccgtttcgctctttct 380
Query: 181 tcctcctttcccgtttcctttcccttctctttgagttgttttca 224
||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 381 tcctccttttccgtttcctttcccttctctttgtgttgttttca 424
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 626
Length adjustment: 9
Effective length of query: 217
Effective length of database: 617
Effective search space: 133889
Effective search space used: 133889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
