Query= MSMg01no063_l10.b1 MSMg01no063_l10.b1 CHROMAT_FILE:
MSMg01no063_l10.b1 PHD_FILE: MSMg01no063_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:11 2005
(231 letters)
>mm_chr7_107583828_107584457
Length = 630
Score = 424 bits (219), Expect = e-123
Identities = 228/231 (98%), Gaps = 1/231 (0%)
Strand = Plus / Plus
Query: 1 attagtgaatgttagtggatagagtagggacaaggacgatcaggaatgtgaccacttagt 60
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 attagtgaatgttagtggatagagtagggacaaggt-gatcaggaatgtgaccacttagt 259
Query: 61 attagtgaatgttagtagacatagcagggacaaggacaaaatatttctagataccaacaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 attagtgaatgttagtagacatagcagggacaaggacaaaatatttctagataccaacaa 319
Query: 121 cttcagattcatgtggcaaatcgtgttgagacctgtggtgtatcacagggaagaggccca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cttcagattcatgtggcaaatcgtgttgagacctgtggtgtatcacagggaagaggccca 379
Query: 181 taagcagcctctaggaggcattctttctcacacaggctttcttacttccat 231
||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 380 taagcagcctctaagaggcattctttctcacacaggctttcttacttccat 430
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 231
Length of database: 630
Length adjustment: 9
Effective length of query: 222
Effective length of database: 621
Effective search space: 137862
Effective search space used: 137862
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no063_l10.g1 MSMg01no063_l10.g1 CHROMAT_FILE:
MSMg01no063_l10.g1 PHD_FILE: MSMg01no063_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:11 2005
(237 letters)
>mm_chr7_107731430_107732066
Length = 637
Score = 437 bits (226), Expect = e-127
Identities = 232/234 (99%)
Strand = Plus / Minus
Query: 1 aatcaaaatagagaagagagacattaaataatatgtagtctcataggtgagataccaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 aatcaaaatagagaagagagacattaaataatatgtagtctcataggtgagataccaaaa 375
Query: 61 ttatgtgaaaagcactcggtaacaaagacggcaatccatactgcccagagaaatcacagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttatgtgaaaagcactcggtaacaaagacggcaatccatactgcccagagaaatcacagg 315
Query: 121 gaaggtgacaggagctggggtgagggtggaatctggggagagttttatcccttggttttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 314 gaaggtgacaggagctggggtgagggtggaatctggggagagttttatcccttgggtttt 255
Query: 181 aaaaacttccggaaccaagatgctgcgtgagcagaaagcgtctcggcaggattt 234
|||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 254 aaaaacttccggaaccaagatgctgcgtgagcagaaagcgtctcggtaggattt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 637
Length adjustment: 9
Effective length of query: 228
Effective length of database: 628
Effective search space: 143184
Effective search space used: 143184
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
