Query= MSMg01no063_m16.b1 MSMg01no063_m16.b1 CHROMAT_FILE:
MSMg01no063_m16.b1 PHD_FILE: MSMg01no063_m16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:18 2005
(597 letters)
>mm_chr7_78788489_78789485
Length = 997
Score = 1123 bits (581), Expect = 0.0
Identities = 593/597 (99%)
Strand = Plus / Plus
Query: 1 ttcatgtaataatgtagagatatatgatattatatatagttatatcatatgataagctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcatgtaataatgtagagatatatgatattatatatagttatatcatatgataagctac 260
Query: 61 tcaactcctcatggccaataaaaccaacaaacattaaagttactataacctttatataat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcaactcctcatggccaataaaaccaacaaacattaaagttactataacctttatataat 320
Query: 121 aatttaaatgtgcagatggtgtttggcagtgctagcattgtgttctgcaaatgataaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatttaaatgtgcagatggtgtttggcagtgctagcattgtgttctgcaaatgataaaaa 380
Query: 181 atgtatctcattgtttgagatacataaccatttataaggagtcccagtattttaataact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtatctcattgtttgagatacataaccatttataaggagtcccagtattttaataact 440
Query: 241 acctggaatcttcttagatgactaagaggtaactagactccaagacataaagctatgtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acctggaatcttcttagatgactaagaggtaactagactccaagacataaagctatgtca 500
Query: 301 aatacatgcataacatatggacgacaatcagtcaaattggttgtcaacttgttaatttct 360
|||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aataaatgtataacatatggacgacaatcagtcaaattggttgtcaacttgttaatttct 560
Query: 361 cataagtactatacctgattgaaaccttctatctcaataagcttatttacaaaggacttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cataagtactatacctgattgaaaccttctatctcaataagcttatttacaaaggacttg 620
Query: 421 tatccagggaataataaaactaaagtagttatctggtcatattggtttgtgccttatgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatccagggaataataaaactaaagtagttatctggtcatattggtttgtgccttatgat 680
Query: 481 gtgttattcattctaagttcaccgtgttgactttggcttgaaagagcctggacaccctca 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 681 gtgttattcattctaagttcaccgtgttgactttggcttgaaagagcctggccaccctca 740
Query: 541 ctgtgcattgcctgtaggacacatctggcgattgcttctctggcttgtcttttgagg 597
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 741 ctgtgcattgcctgtaggacacatctggggattgcttctctggcttgtcttttgagg 797
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space: 579369
Effective search space used: 579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_m16.g1 MSMg01no063_m16.g1 CHROMAT_FILE:
MSMg01no063_m16.g1 PHD_FILE: MSMg01no063_m16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:18 2005
(285 letters)
>mm_chr7_78971407_78972094
Length = 688
Score = 530 bits (274), Expect = e-155
Identities = 284/288 (98%), Gaps = 3/288 (1%)
Strand = Plus / Minus
Query: 1 tctttctgagattgctcggcaagtctttaagttcttgctccactttggagagactggaaa 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 488 tctttctgagattgctcggcaagtctttaagttcttgctccactttgaagagactggaaa 429
Query: 61 tcatgggtactgcttaatgggtgtgatttatgcggaaaggcaatatgaagttcctgctgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tcatgggtactgcttaatgggtgtgatttatgcggaaaggcaatatgaagttcctgctgg 369
Query: 121 taggcccatgtgcagacaaggccttggccctagaccgagaagttggctaatcagggaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 taggcccatgtgcagacaaggccttggccctagaccgagaagttggctaatcagggaccc 309
Query: 181 ac-ttttttttttttttttgcatgttttaagtttaaagtttttatacacatgtc--tttt 237
|| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 308 actttttttttttttttttgcatgttttaagtttaaagtttttatacacatgtctttttt 249
Query: 238 ttttttaacatgtctgctgtggttttgcttcttaattgtgtcacagac 285
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 ttttttaacatgtctgctgtggttttgcttcttaattgtgtcacagac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 285
Length of database: 688
Length adjustment: 9
Effective length of query: 276
Effective length of database: 679
Effective search space: 187404
Effective search space used: 187404
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
