Query= MSMg01no063_m17.b1 MSMg01no063_m17.b1 CHROMAT_FILE:
MSMg01no063_m17.b1 PHD_FILE: MSMg01no063_m17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:18 2005
(315 letters)
>mm_chr7_103596889_103597604
Length = 716
Score = 574 bits (297), Expect = e-168
Identities = 306/309 (99%), Gaps = 1/309 (0%)
Strand = Plus / Minus
Query: 5 gaattc-cagtatccaaggaccggagcccacttctggtctctcagacaagacgtagcatc 63
|||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 386 gaattcacagtatccaaggaccggagcccacttcttgtctctcagacaagacgtagcatc 327
Query: 64 agagaagccaaatacacatgtctcctgactgggcagtgaactcttacctgctgctctgag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agagaagccaaatacacatgtctcctgactgggcagtgaactcttacctgctgctctgag 267
Query: 124 ttcacagagctagacagggacagaccatagcctacatgttctctccagtctgagatgtca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 ttcacagagctagacagggacagaccatagcctacatgttctctccagtctgagatgtca 207
Query: 184 ctgtgtgatggaaagaatgtggcctttgcagtgaggttctgggctctgtctccagctctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ctgtgtgatggaaagaatgtggcctttgcagtgaggttctgggctctgtctccagctctg 147
Query: 244 ctaattgttacctgaatagacttttctgtaaagactccctctaacctggccagatcccga 303
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 146 ctaattgttacctgaatagacgtttctgtaaagactccctctaacctggccagatcccga 87
Query: 304 ggtgtctcc 312
|||||||||
Sbjct: 86 ggtgtctcc 78
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 716
Length adjustment: 9
Effective length of query: 306
Effective length of database: 707
Effective search space: 216342
Effective search space used: 216342
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no063_m17.g1 MSMg01no063_m17.g1 CHROMAT_FILE:
MSMg01no063_m17.g1 PHD_FILE: MSMg01no063_m17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:18 2005
(283 letters)
>mm_chr7_103449462_103450144
Length = 683
Score = 501 bits (259), Expect = e-146
Identities = 277/283 (97%)
Strand = Plus / Plus
Query: 1 atatgactctaaactggcattctggccctggagatgggtcccggagcacagctgctcagc 60
|||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 201 atatgactctaaactggcattctggccctggagatgggtcccagagcacagctgttcagc 260
Query: 61 tgtttatggatttgcaatttcccagagatctgtgactaacctcgctccgggagagactgg 120
|||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 261 tgtttagggatttgcaatttcccagagatctgtgactaacctcgctccgagagagactgg 320
Query: 121 gttaggtgacttggagtgcagcctgcacactggaatctaagtgttcttcaagtggttctt 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttcggtgacttggagtgcagcctgcacactggaatctaagtgttcttcaagtggttctt 380
Query: 181 gttatggagtgagggctcagagtccccagccttgatgcttgtcttggggcccctaagctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 381 gttatggagtgagggctcagagtccccagccttgatgcttgtcttggggccccaaagctt 440
Query: 241 gcaactaccagtcatgcaagggtcttagagaaaggtcagacat 283
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcaactaccagtcatgcaagggtcttagagaaaggtcagacat 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
