TGCGGCGCTATACGACTCCTATAGTCAGAGGATCCGCGGAATTCAGGAAA
AGCTCCATGTGGCATGTTTTCCATAGAGACATTTAAACAAATAACAATCA
TAATAAGTAATCTGAGGCAAACTCATTCTTATCTGCTACAATTACATGCT
TTTGATAAAATTGAGGTCACAAGTCTCTTGTCGTCTTTCCTCATAAGCAC
CCAGAATTCCTCCTACATAACTCCAATTTTAGACGTGTCCCGGCACTACC
AAAAGAAGTCTGCAGATTCAATGCAATGTCATCAGCATTCCAATGCAATT
CCTCATCAAATTTGAAAATAAAAAACTTAAATTTTATAAAAAACATAAAA
GACACAGAATCATAAAAATACAATCTTATCATCATCCCTGATTTCAATTT
TTTGTTATAGAGCTATAATAATAAAAACAGCATGATATTGCAAAATAAAA
GACTCGTTGACCAATGGAATAGGAAATAGACCCACACTCCTAAAGCCACG
TTGATTTTTATTTACAAAGCAGCCAACAGTACACAGCAGAGAAATAATGA
CATCTTTAACCAGTGTTGCTGATCAAAGTGTATAGCTATAGGTAGAAGAA
TAAAACTCAGTCCTTACCTCTCATCCTGCACAAAAATTCAGCTCCAAATG
CAGTGACTTAGGACCTGATGTGCTGA

TTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTNNNNNTNCNTTTNNTANT
TTTTCTTATTCTCTAGACTTAGAGTGGAGAGGAGGGCGCCGACCCCCCCA
ATTTGTGGGACGCTACATAAGGATCCGCGCTAATCCGACGCGAGAGGCGG
GAGGCGGAGCGTTAGCTCCATCCCACCCTGCGATACGGTTTGTGTTGTAC
ACGGGGCGGAAAGTAGCCAGGGGGGGGGGTGGCTGGGGTGATCATTCCAT
CGGTGCTCGCGGAGGTCGGGACTGAAAGGAGGAAGAAATGGACATGAAAT
ACGCCTCTTCTGGCTATTCGAGCGAGTCTCATGGTGTGGGGGGGGGGAGA
GCTTATCGTGCGTGAGGCAGGTATGGGCCAGAGTGTGCTAGTGCGTGCCT
GAATTGAAAAGAGCGGATGGTGCGCACTTATTAACATAGGGTCCGCTAGG
AGACATGGATGGGGATGAGAGCCTGTTGAGGGTACGAGTTGGGCAAGAGG
GGAAGCGAAGCATGGTCGGTCGGTGACAGAGCATGAGTCGAAGTCTGAAT
CCTCTATAACCGCCCAGCGTTCCCGGCGATTAGCTGGGTTAGAACGACTC
TGTTCGCATGGAGTGGCGCAACGTCCGACCACTAGGCGCGGGAGGCTGCC
GTTGGGGTGGATTCGGCGGGGGTCCGAGTATTGCATGTTATGTTGTTTTA
TTCTTGAAAGTTGTATAAAAAACGATTAGTAGTCGTAATAACGCCAGGAG
GCACAAACGACTAAACCAGCGCTATTCTCGCCGTGACCCGTCATTCGGCC
GCGGGGGCGCGCCGTAGTTGTATGTACCGGCATAGGAGTTAGCAGAACGC
GAGTAAAATATTACCGCCGACCAATATAAGAAATATN

Query= MSMg01no065_l13.b1 MSMg01no065_l13.b1 CHROMAT_FILE:
MSMg01no065_l13.b1 PHD_FILE: MSMg01no065_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:18 2005
         (615 letters)



>mm_chr7_79960947_79961962
          Length = 1016

 Score = 1065 bits (551), Expect = 0.0
 Identities = 596/611 (97%), Gaps = 1/611 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattc-aggaaaagctccatgtggcatgttttccatagagacatttaaacaaataacaa 64
           |||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcaaggaaaagcttcatgtggcatgttttccatagagacatttaaacaaataacaa 265

                                                                       
Query: 65  tcataataagtaatctgaggcaaactcattcttatctgctacaattacatgcttttgata 124
           | ||||||||||||||| || ||||||||||||||||||||||||||||| |||||||||
Sbjct: 266 ttataataagtaatctggggtaaactcattcttatctgctacaattacatacttttgata 325

                                                                       
Query: 125 aaattgaggtcacaagtctcttgtcgtctttcctcataagcacccagaattcctcctaca 184
           ||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||
Sbjct: 326 aaattgaggtcacaagtctcttgtcttcttttctcataagcacccagaattcctcctgca 385

                                                                       
Query: 185 taactccaattttagacgtgtcccggcactaccaaaagaagtctgcagattcaatgcaat 244
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 386 taactccaattttagacgtgtcccagcactaccaaaagaagtctgcagattcaatgcaat 445

                                                                       
Query: 245 gtcatcagcattccaatgcaattcctcatcaaatttgaaaataaaaaacttaaattttat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gtcatcagcattccaatgcaattcctcatcaaatttgaaaataaaaaacttaaattttat 505

                                                                       
Query: 305 aaaaaacataaaagacacagaatcataaaaatacaatcttatcatcatccctgatttcaa 364
           |||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||
Sbjct: 506 aaaaaacataaaagacacagaaccttaaaaatacaattttatcatcatccctgatttcaa 565

                                                                       
Query: 365 ttttttgttatagagctataataataaaaacagcatgatattgcaaaataaaagactcgt 424
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tattttgttatagagctataataataaaaacagcatgatattgcaaaataaaagactcgt 625

                                                                       
Query: 425 tgaccaatggaataggaaatagacccacactcctaaagccacgttgatttttatttacaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgaccaatggaataggaaatagacccacactcctaaagccacgttgatttttatttacaa 685

                                                                       
Query: 485 agcagccaacagtacacagcagagaaataatgacatctttaaccagtgttgctgatcaaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 agcagccaacagtacacagcagagaaataatgacatctttaaccagtgttgctgatcaaa 745

                                                                       
Query: 545 gtgtatagctataggtagaagaataaaactcagtccttacctctcatcctgcacaaaaat 604
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gtggatagctataggtagaagaataaaactcagtccttacctctcatcctgcacaaaaat 805

                      
Query: 605 tcagctccaaa 615
           |||||||||||
Sbjct: 806 tcagctccaaa 816


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1016
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1006
Effective search space:   608630
Effective search space used:   608630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)