Query= MSMg01no066_a20.b1 MSMg01no066_a20.b1 CHROMAT_FILE:
MSMg01no066_a20.b1 PHD_FILE: MSMg01no066_a20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:43 2005
(149 letters)
>mm_chr7_135536054_135536602
Length = 549
Score = 275 bits (142), Expect = 1e-78
Identities = 145/146 (99%)
Strand = Plus / Minus
Query: 1 gctggttgggagcagggtttcaggctgacttcctacccagtgtgggtgcaagccaggctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 346 gctggttgggagcagggtttcaggctgacttcctacccagtgtgggtgcaaaccaggctt 287
Query: 61 catagcacctgcaggaagggccctgacctgtgcctggaaggagccgagaccggatacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 catagcacctgcaggaagggccctgacctgtgcctggaaggagccgagaccggatacatc 227
Query: 121 tatctgtctgtctcagggaagggagg 146
||||||||||||||||||||||||||
Sbjct: 226 tatctgtctgtctcagggaagggagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 549
Length adjustment: 8
Effective length of query: 141
Effective length of database: 541
Effective search space: 76281
Effective search space used: 76281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no066_a20.g1 MSMg01no066_a20.g1 CHROMAT_FILE:
MSMg01no066_a20.g1 PHD_FILE: MSMg01no066_a20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:43 2005
(290 letters)
>mm_chr7_135351486_135352175
Length = 690
Score = 478 bits (247), Expect = e-139
Identities = 280/291 (96%), Gaps = 2/291 (0%)
Strand = Plus / Plus
Query: 1 accccacctccatacacagtttcctctaatctcctccctatttagttacattatggctac 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 accccacctccatacacagtttcctctaatctcctccctatttagttccattatggctac 260
Query: 61 tgaagaaaacagtaagaggaacatttgtacttacagagactctaggtctccctttcctcc 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tgaagaaaacagtaagaggaacatttgtacttacagaggctctaggtctccctttcctcc 320
Query: 121 aaagtagcctctcagaggtttgctgagaattcccatccttgccttctctgctctttgttg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 taagtagcctctcagaggtttgctgagaattcccatccttgccttctctgctctttgcag 380
Query: 181 tctttcagtgaatag-tgcaaaggtcactactgtcctctaccgccatcgtgtggtacact 239
| ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccactcagtgaat-gctgcaaaggtcactactgtcctctaccgccatcgtgtggtacact 439
Query: 240 tgagcacctacatggaggtttttacttaaccaactttctacaggtttctgt 290
||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 440 tgagcacctacatggaggtttttacttaaccaattttctacaggtttctgt 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
