Query= MSMg01no066_b08.b1 MSMg01no066_b08.b1 CHROMAT_FILE:
MSMg01no066_b08.b1 PHD_FILE: MSMg01no066_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:46 2005
(400 letters)
>mm_chr7_88852946_88853743
Length = 798
Score = 762 bits (394), Expect = 0.0
Identities = 398/400 (99%), Gaps = 2/400 (0%)
Strand = Plus / Plus
Query: 1 aagtcttccaccaatatttgttgaatgaataagtaaacagaccaagccctatctatacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtcttccaccaatatttgttgaatgaataagtaaacagaccaagccctatctatacaa 260
Query: 61 aattggtcaggatctgtgcacacaggtgactctgtttagagccaagactaatgaacagtc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aattggtcaggatctgtgcacacaggtgactctgtttagagccaagactaatgaacagtc 320
Query: 121 agccccagaggaagttcttctaacacaagctgaattccaaagaccagggctgtgccaagg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccccagaggaagttcttctaacacaagctgaattccaaagaccagggctgtgccaagg 380
Query: 181 tgctgaagggaaggggtcactggtaaagtcccagaaagaagccagaagtaggaggatcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgctgaagggaaggggtcactggtaaagtcccagaaagaagccagaagtaggaggatcaa 440
Query: 241 aagcaggagccagcaaatgtgtgttaggggtatggaaaacaagactctctgagcaaagga 300
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 aagcaggagccagcaaatgtgtgttaggggtatggaaaacaagactct--gagcaaagga 498
Query: 301 gcccagtggtgttcaagccctggctgggaggtccatctctttgctcctcagatagacagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gcccagtggtgttcaagccctggctgggaggtccatctctttgctcctcagatagacagg 558
Query: 361 gtgcacccacatcaccttggcaggatgcaatgaggccaag 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gtgcacccacatcaccttggcaggatgcaatgaggccaag 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 798
Length adjustment: 9
Effective length of query: 391
Effective length of database: 789
Effective search space: 308499
Effective search space used: 308499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_b08.g1 MSMg01no066_b08.g1 CHROMAT_FILE:
MSMg01no066_b08.g1 PHD_FILE: MSMg01no066_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:11:46 2005
(351 letters)
>mm_chr7_88969901_88970651
Length = 751
Score = 663 bits (343), Expect = 0.0
Identities = 349/351 (99%)
Strand = Plus / Minus
Query: 1 aagctccagctcctgctgtctttggacttggctctcactccagctctacagtccctctcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aagctccagctcctgctgtctttggacttggctctcactccagctctacagtccctctcc 492
Query: 61 tagtcacttgggaacttgtctgttgggggaagtttaatgctttacagctgttaaaggcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tagtcacttgggaacttgtctgttgggggaagtttaatgctttacagctgttaaaggcca 432
Query: 121 ttgtggtaccaccttgcccctttatctattcaatgtcccacctaactactagtgacattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 ttgtggtaccaccttgcccctttatctattcaatgtcccacctaactactagtgacattt 372
Query: 181 tccttattttaatgcctgccttccaaggcctcttgtaactgtatagcctctatctaaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 tccttattttaatgcctgccttccaaggcctcttgtaactgtatagcctctatctaaaag 312
Query: 241 acagtaattactatacttaaggcagtaattttgggctttactttttgattaaatcactgt 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 311 acagtaattactatacttaaggtagtaattttgggctttactttttgattaaatcactgt 252
Query: 301 tcctttccccttcaggcaaatttgtaccctagctcatttaatctctcagcg 351
|||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tcctttacccttcaggcaaatttgtaccctagctcatttaatctctcagcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 351
Length of database: 751
Length adjustment: 9
Effective length of query: 342
Effective length of database: 742
Effective search space: 253764
Effective search space used: 253764
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
