Query= MSMg01no066_f19.b1 MSMg01no066_f19.b1 CHROMAT_FILE:
MSMg01no066_f19.b1 PHD_FILE: MSMg01no066_f19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:08 2005
(279 letters)
>mm_chr7_144939293_144939971
Length = 679
Score = 507 bits (262), Expect = e-148
Identities = 274/280 (97%), Gaps = 6/280 (2%)
Strand = Plus / Minus
Query: 3 gaattctctcttgtctcccc---ttcaacagcgttaggacagtttgcttgaggttttctt 59
|||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct: 479 gaattctctcttgtct--ccaatttcaacagcgttaggacagtttgcttgaggttttctt 422
Query: 60 ggtatttatcccaacttttgaatttatcctttagtgtccttttcaatgcctaatttgaag 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 -gtatttatcccaacttttgaatttatcctttagtgtccttttcaatgcctaatttgaag 363
Query: 120 tagtgagtttgaccgtgagatgtttttgagtttcagcccttgttgtgaaactttctagtg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tagtgagtttgaccgtgagatgtttttgagtttcagcccttgttgtgaaactttctagtg 303
Query: 180 tctaaccacttgtctgcttttctttttctccccagcaatttctctcaggggtatattcag 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tctaaccacttgtctgcttttctttttctccccagcaatttctctcaggggtatattcag 243
Query: 240 agatgttctggtgaatttattaaactccccctggagtggc 279
||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 agatgttctggtgaatttattaaactccccctggagtggc 203
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no066_f19.g1 MSMg01no066_f19.g1 CHROMAT_FILE:
MSMg01no066_f19.g1 PHD_FILE: MSMg01no066_f19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:08 2005
(252 letters)
>mm_chr7_144740986_144741637
Length = 652
Score = 480 bits (248), Expect = e-140
Identities = 251/252 (99%)
Strand = Plus / Plus
Query: 1 ttgaatgacagctttgagtcatgccctttcagacgtgtaggccgggtggatgctggggtc 60
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 201 ttgaatgacagctttgagtcatgccctttcagacatgtaggccgggtggatgctggggtc 260
Query: 61 atgtgctgcaaggggtagttcctatcccaggagggttaaggctgccttgctttcaagtct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtgctgcaaggggtagttcctatcccaggagggttaaggctgccttgctttcaagtct 320
Query: 121 gagttgtctcaagcataaggcacggggcacgcttgtcatctgctcctaaagtgtccggct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagttgtctcaagcataaggcacggggcacgcttgtcatctgctcctaaagtgtccggct 380
Query: 181 ttgaaattcccacattgaaaaagtaattaatgggttgattgattagtcagttgctgggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgaaattcccacattgaaaaagtaattaatgggttgattgattagtcagttgctgggaa 440
Query: 241 ggttcacagaat 252
||||||||||||
Sbjct: 441 ggttcacagaat 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 652
Length adjustment: 9
Effective length of query: 243
Effective length of database: 643
Effective search space: 156249
Effective search space used: 156249
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
