Query= MSMg01no066_m23.b1 MSMg01no066_m23.b1 CHROMAT_FILE:
MSMg01no066_m23.b1 PHD_FILE: MSMg01no066_m23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:44 2005
(451 letters)
>mm_chr7_102504049_102504899
Length = 851
Score = 760 bits (393), Expect = 0.0
Identities = 434/449 (96%), Gaps = 4/449 (0%)
Strand = Plus / Plus
Query: 5 gaattctctcatacttccaccctttcagtttaaaattc--tgcttgaaatcaagatatca 62
||||||||||||||| | |||||||||||||||||||| | |||||||||||||||||
Sbjct: 205 gaattctctcatactactaccctttcagtttaaaattccat--ttgaaatcaagatatca 262
Query: 63 ggagttagcaggagatcattccagaagaatctctgttatctgagttggttaaatgagtct 122
|||| |||||| ||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 263 ggaggtagcagaagagcatttcagaagaatctctgttatctgagttggttaaatgagtct 322
Query: 123 ccatacggggaccactagtttgcatgtgtgatgctcattcattgggaagattatggctct 182
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccatacagggaccactagtttgcatgtgtgatgctcattcattgggaagattatggctct 382
Query: 183 gttattttgggaactctgcatgggagttatttgcatgcaacttgatgtttgccttgaaga 242
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 383 gttattttgggaactctgcatgggagttatttgcataaaacttgatgtttgccttgaaga 442
Query: 243 tcacgtccagatatgtcaaacagggaaaatataatattttgctaaattccctattaaaca 302
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tcacatccagatatgtcaaacagggaaaatataatattttgctaaattccctattaaaca 502
Query: 303 ccagggcatttgtttgccattgctactaattaccctgttacttttgagcaaataagagtt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ccagggcatttgtttgccattgctactaattaccctgttacttttgagcaaataagagtt 562
Query: 363 ttatctttttagcctaattgaaattttattatgaacaaacaaaagtactggaaatgacca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 ttatctttttagcctaattgaaattttattatgaacaaacaaaagtactggaaatgacca 622
Query: 423 tccatgtgtatacacacacacacacacac 451
|||||||||| ||||||||||||||||||
Sbjct: 623 tccatgtgtacacacacacacacacacac 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 851
Length adjustment: 10
Effective length of query: 441
Effective length of database: 841
Effective search space: 370881
Effective search space used: 370881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_m23.g1 MSMg01no066_m23.g1 CHROMAT_FILE:
MSMg01no066_m23.g1 PHD_FILE: MSMg01no066_m23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:44 2005
(359 letters)
>mm_chr7_102605680_102606438
Length = 759
Score = 656 bits (339), Expect = 0.0
Identities = 354/359 (98%)
Strand = Plus / Minus
Query: 1 atatccaatgagtaatctgctaatccaattttcaagttccctatctcttattattaatat 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 559 atatccaatgagtaatctgctaatccagttttcaagttccctatctcttattattaatat 500
Query: 61 ttattggagtaaattcatttaaaaactattaagtcaacactaactttttctttgctttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ttattggagtaaattcatttaaaaactattaagtcaacactaactttttctttgctttct 440
Query: 121 tacattgatccaaatgcccagtattatgaatgcacactaattatgtgcagtataggcatc 180
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 439 tacattgatccaaatacccagtattatgaatgcacactaattatgtgcagaataggcatc 380
Query: 181 caaatgcctttttccctttcctggagccctgtgagtagtgctatcatttctcttttatat 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 caaatgcctttttccccttcctggagccctgtgagtagtgctatcatttctcttttatat 320
Query: 241 ataaagaaatgaaaacttgaagatctttggcaatttgcctaaaaccacttgagtaagcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 319 ataaagaaatgaaaacttgaagatctttggcaatttgcctaaaaccacttgagtaggcag 260
Query: 301 aaagaaacatttagtttacttccatatttctagctacccaagtcagattttaaaatagt 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aaagaaacatttagtttacttccatatttctagctacccaagtcagattttaaaatagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 359
Length of database: 759
Length adjustment: 9
Effective length of query: 350
Effective length of database: 750
Effective search space: 262500
Effective search space used: 262500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
