Query= MSMg01no066_o12.b1 MSMg01no066_o12.b1 CHROMAT_FILE:
MSMg01no066_o12.b1 PHD_FILE: MSMg01no066_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:51 2005
(616 letters)
>mm_chr7_87620344_87621359
Length = 1016
Score = 1125 bits (582), Expect = 0.0
Identities = 605/614 (98%), Gaps = 4/614 (0%)
Strand = Plus / Minus
Query: 5 gaattcacgaaatccgctttcctctagttatttaagtgttgataagtgagcatggtagct 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 gaattcacgaaatccgttttcctctagttatttaagtgttgataagtgagcatggtagct 716
Query: 65 tgtgcctgtggtcccctcacttgggaagctgaggccagacgctcgtgagtttgaaaccaa 124
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 715 tgtgcctgtggtcccctcacttgggaagctaaggccagacgctcgtgagtttgaaaccaa 656
Query: 125 actgggccgtatgagagcctgtgataaatacaaacaaaaggaagaactttcagaaatgat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 actgggccgtatgagagcctgtgataaatacaaacaaaaggaagaactttcagaaatgat 596
Query: 185 tgggatagcctgtgccatgtgcctcacagccatgaacttacttaagtaacactggggctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tgggatagcctgtgccatgtgcctcacagccatgaacttacttaagtaacactggggctg 536
Query: 245 agcttgcctgtgtgactctagagctactgtgggccagcatctctcttttccgcagccttt 304
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 535 agcttgcctgtgtgactctagagctactgtgggccagcatctctcttttccacagccttt 476
Query: 305 gccagctctctagcattagtctgcagtgcgctttcttttacatggaatactcttcccccc 364
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 475 gccagctctctagcattagtctgcagtgcgctttcttttacatggaatactc--cccccc 418
Query: 365 cc--ttttttttcaatttaatacattggtgctttgactatacacataactatgtgaggat 422
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ccctttttttttcaatttaatacattggtgctttgactatacacataactatgtgaggat 358
Query: 423 gtcagattgcttggaacaggagttagagagttgtaagctggcatgtgggtgctggaactg 482
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 357 gtcagattgcttggaacaggagttagacagttgtaagctggcatgtgggtgctggaactg 298
Query: 483 aacctatgtcctctgggagagcagcctgtgctcttaactgccaagctgtctctgcagcaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aacctatgtcctctgggagagcagcctgtgctcttaactgccaagctgtctctgcagcaa 238
Query: 543 gccagtcagtgcctcctgtgctgatggcatgctgatctgctgaccctgggtctcttttac 602
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 237 gccagtcagtgcctcctgtgctgatggtatgctgatctgctgaccctgggtctcttttac 178
Query: 603 tcctagtggcaaaa 616
||||||||||||||
Sbjct: 177 tcctagtggcaaaa 164
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space: 609636
Effective search space used: 609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no066_o12.g1 MSMg01no066_o12.g1 CHROMAT_FILE:
MSMg01no066_o12.g1 PHD_FILE: MSMg01no066_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:51 2005
(358 letters)
>mm_chr7_87502587_87503344
Length = 758
Score = 685 bits (354), Expect = 0.0
Identities = 357/358 (99%)
Strand = Plus / Plus
Query: 1 agatcagcctggtctacagagtgagttctaggacagccagggctatacagagaaaccctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agatcagcctggtctacagagtgagttctaggacagccagggctatacagagaaaccctg 260
Query: 61 tctcaaaaacaaaacaaaataaaaaacaaacaaatgaatgaaaaaaatgagagagagaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tctcaaaaacaaaacaaaataaaaaacaaacaaatgaatgaaaaaaatgagagagagaga 320
Query: 121 gaggaaaagaaaaagaagagctgaacccttcagctgaaagtcacccttcaatactcaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaggaaaagaaaaagaagagctgaacccttcagctgaaagtcacccttcaatactcaact 380
Query: 181 gcttccaccaaaagacaggatgccaagtgtgactgagaggaaggggagggctcaccccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gcttccaccaaaagacaggatgccaagtgtgactgagaggaaggggagggctcaccccct 440
Query: 241 ttccccctcttcaggctctggggtgaggggacctggagagaggggaggtaagtccacagc 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 441 ttccccctcttcaggctctggggtgaggggacctggagagaggggagggaagtccacagc 500
Query: 301 atgggctgactggaacaaagggtaggctggttccctactcaccattaccgaggctgga 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgggctgactggaacaaagggtaggctggttccctactcaccattaccgaggctgga 558
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 358
Length of database: 758
Length adjustment: 9
Effective length of query: 349
Effective length of database: 749
Effective search space: 261401
Effective search space used: 261401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
