Query= MSMg01no070_e18.b1 MSMg01no070_e18.b1 CHROMAT_FILE:
MSMg01no070_e18.b1 PHD_FILE: MSMg01no070_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:18 2005
(109 letters)
>mm_chr7_16635572_16636080
Length = 509
Score = 203 bits (105), Expect = 2e-57
Identities = 108/109 (99%)
Strand = Plus / Plus
Query: 1 ctgactttgagctggctatttccttgccccagctcctccaagtgctgtgctaccatgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgactttgagctggctatttccttgccccagctcctccaagtgctgtgctaccatgtct 260
Query: 61 gtctaggttctgcgtctttctgcactgtggtatatcttctacccctatg 109
|||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtctaggttctgggtctttctgcactgtggtatatcttctacccctatg 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 509
Length adjustment: 8
Effective length of query: 101
Effective length of database: 501
Effective search space: 50601
Effective search space used: 50601
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no070_e18.g1 MSMg01no070_e18.g1 CHROMAT_FILE:
MSMg01no070_e18.g1 PHD_FILE: MSMg01no070_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:19 2005
(104 letters)
>mm_chr7_16800036_16800540
Length = 505
Score = 172 bits (89), Expect = 5e-48
Identities = 101/105 (96%), Gaps = 1/105 (0%)
Strand = Plus / Minus
Query: 1 caatg-aattttatttacagagacatgtgtcaggctgggtgtcatcctagccgttgctct 59
||||| ||||||||||||||||||||||| |||||||||||||||| |||| ||||||||
Sbjct: 305 caatgaaattttatttacagagacatgtggcaggctgggtgtcatcatagctgttgctct 246
Query: 60 tggccgttatgcttagctgtttccaagcacctagacagggcctcg 104
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tggccgttatgcttagctgtttccaagcacctagacagggcctcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 2
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 505
Length adjustment: 8
Effective length of query: 96
Effective length of database: 497
Effective search space: 47712
Effective search space used: 47712
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
