Query= MSMg01no070_i19.b1 MSMg01no070_i19.b1 CHROMAT_FILE:
MSMg01no070_i19.b1 PHD_FILE: MSMg01no070_i19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:39 2005
(547 letters)
>mm_chr7_103774368_103775313
Length = 946
Score = 944 bits (488), Expect = 0.0
Identities = 530/544 (97%), Gaps = 3/544 (0%)
Strand = Plus / Plus
Query: 5 gaattctccttcctctttcaa-gaatatggtatttgaaatatactttcccaacagatact 63
||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctccctcctctttcaaagaatatggtatttgaaatatactttcccaacagatact 264
Query: 64 agaaagggtatatctatcacaggtcagaagaaaaatccacagaaaggccaaagaagtcag 123
||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||
Sbjct: 265 agaaagggtatatctatcacaggtcagaagaaaaatccacacaaaggccaaagaggtcag 324
Query: 124 gacagcaagctcctgtgagtagtcagtaactgtgagcatagccatggagaccttctacag 183
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 325 gacagcaagctcctgtgagtagtcagtaactgtgagcgtagccatggagaccttctacag 384
Query: 184 aggtcggcaagggcagtcctcagcctggtttaacataagcttaatcacagtggctttatc 243
|||||||||||||||||||| |||||||||||||||||||| |||| ||||||||||||
Sbjct: 385 aggtcggcaagggcagtcctgagcctggtttaacataagct-aatcgcagtggctttatt 443
Query: 244 gaagagtgacaactttttcaaaagaagcaatagtcagcagcagcagcaggcattactacc 303
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 444 gaagagtgacaactttttcaaaagaagcaatag-cagcagcagcagcaggcattactacc 502
Query: 304 aatgggtacgctggcacctggtatggctcagctggacctcaggaaatcatttatgacaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 aatgggtacgctggcacctggtatggctcagctggacctcaggaaatcatttatgacaca 562
Query: 364 gggagtcatctgctgcactttggataagcccttcttcaggaggtgcacaagctcaggcct 423
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 563 gggagtcatctgctgcactttggataagcccttcttcaggaagtgcacaagctcaggcct 622
Query: 424 ggctggatggctgtgtggaatactggcagcgagatggtccccagtgagcatgagcaggct 483
|||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||
Sbjct: 623 ggctggatggctgtgtggaaaactggcagtgagatggtccccagtgagcatgagcaggct 682
Query: 484 tccaagtgcaggctctgtgggggtgttgaggagggcaggaagaaggatcctgcttgagca 543
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 683 tccaagtgcaggctctgtgggggtgttgaggagggcaggaagaaggaccctgcttgagca 742
Query: 544 gctg 547
||||
Sbjct: 743 gctg 746
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 946
Length adjustment: 10
Effective length of query: 537
Effective length of database: 936
Effective search space: 502632
Effective search space used: 502632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no070_i19.g1 MSMg01no070_i19.g1 CHROMAT_FILE:
MSMg01no070_i19.g1 PHD_FILE: MSMg01no070_i19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:40 2005
(418 letters)
>mm_chr7_103926187_103927004
Length = 818
Score = 808 bits (418), Expect = 0.0
Identities = 418/418 (100%)
Strand = Plus / Minus
Query: 1 attctctcatcattctggttagagctatgcagaaatgcccagtacaacacagtttagaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 attctctcatcattctggttagagctatgcagaaatgcccagtacaacacagtttagaat 559
Query: 61 cccaaggctgaacaaggggagggtgtaagtttttaaattatctgctcaccaagaggaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cccaaggctgaacaaggggagggtgtaagtttttaaattatctgctcaccaagaggaaag 499
Query: 121 gcatcaaagattagaatgtaagggcaaggaagaggaaatgagtccacagcaggaggagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gcatcaaagattagaatgtaagggcaaggaagaggaaatgagtccacagcaggaggagtt 439
Query: 181 tgcagttagggccacacccccaccagtgctgaaaggttaaattgtaacagtcgaacccac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tgcagttagggccacacccccaccagtgctgaaaggttaaattgtaacagtcgaacccac 379
Query: 241 cctccaccctcgccaaccctttccccggtatttaccaatggaacagtcgtgtccagtcca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 cctccaccctcgccaaccctttccccggtatttaccaatggaacagtcgtgtccagtcca 319
Query: 301 gcttgggtcacagttgcaaagtcctgtgtctgggaggaaggttccgtggcctgagcactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gcttgggtcacagttgcaaagtcctgtgtctgggaggaaggttccgtggcctgagcactg 259
Query: 361 gtccaagcatgtggccctgggtgtctcgcagttggtgcctccccatcccacagagcag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 gtccaagcatgtggccctgggtgtctcgcagttggtgcctccccatcccacagagcag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
