Query= MSMg01no073_e11.b1 MSMg01no073_e11.b1 CHROMAT_FILE:
MSMg01no073_e11.b1 PHD_FILE: MSMg01no073_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:17 2005
(307 letters)
>mm_chr7_148760784_148761490
Length = 707
Score = 567 bits (293), Expect = e-166
Identities = 301/304 (99%), Gaps = 1/304 (0%)
Strand = Plus / Minus
Query: 5 gaattccaggacagccagggctacacagagaaaccctgcttccaaaanc-aacaaacaaa 63
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 432 gaattccaggacagccagggctacacagagaaaccctgcttccaaaaacaaacaaacaaa 373
Query: 64 actggggcatccatagccaaaaaatcaggtatcttacaagggcctgatttcagggtgtaa 123
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 actggggcatccatagtcaaaaaatcaggtatcttacaagggcctgatttcagggtgtaa 313
Query: 124 ggtaacagggcagaatggtgtcatggtagatagatctaggtatggacccataactttaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggtaacagggcagaatggtgtcatggtagatagatctaggtatggacccataactttaat 253
Query: 184 ccaagcactagggaggtagaacaagcaatctctatgtaaagctaacctggtctacataga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 ccaagcactagggaggtagaacaagcaatctctatgtaaagctaacctggtctacataga 193
Query: 244 gtcccaggccagtaggggttacaaagtgtaacctatgccaaaaaattaattttagataag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gtcccaggccagtaggggttacaaagtgtaacctatgccaaaaaattaattttagataag 133
Query: 304 tgtg 307
||||
Sbjct: 132 tgtg 129
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_e11.g1 MSMg01no073_e11.g1 CHROMAT_FILE:
MSMg01no073_e11.g1 PHD_FILE: MSMg01no073_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:17 2005
(471 letters)
>mm_chr7_148625977_148626847
Length = 871
Score = 895 bits (463), Expect = 0.0
Identities = 469/471 (99%)
Strand = Plus / Plus
Query: 1 cagtgccacctgagtggtgatatcatcccaggtggttgtcaggggtgttcggtagagcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtgccacctgagtggtgatatcatcccaggtggttgtcaggggtgttcggtagagcag 260
Query: 61 atgcaggtgggagcggtctagactgaagcctggatggaaaatgacagaaggctgaagccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgcaggtgggagcggtctagactgaagcctggatggaaaatgacagaaggctgaagccc 320
Query: 121 ctctgaatgctattcccccctctaagcacccacctttagtcctgtggcgtgcagcttcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctgaatgctattcccccctctaagcacccacctttagtcctgtggcgtgcagcttcac 380
Query: 181 ctgtaacgccaggaggcaggggcaactgcacagtgacaggttgtaggaagctgggggggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgtaacgccaggaggcaggggcaactgcacagtgacaggttgtaggaagctgggggggc 440
Query: 241 cgctctgtgattggcacagcagagggcttactgatgcctctgattcttccagaagggttc 300
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgctctgtgaaaggcacagcagagggcttactgatgcctctgattcttccagaagggttc 500
Query: 301 tcagctctagtccagccatatgcactacctagacagagaaccatttcagtgccctcctgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagctctagtccagccatatgcactacctagacagagaaccatttcagtgccctcctgt 560
Query: 361 ctgctgaggcaccacctcccgccacccttggtactaccctgtcaatacctgcatggagac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgctgaggcaccacctcccgccacccttggtactaccctgtcaatacctgcatggagac 620
Query: 421 ttgccgaggctcttctgtaaccccagggggaaaagtgactctgaccccagg 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgccgaggctcttctgtaaccccagggggaaaagtgactctgaccccagg 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
