Query= MSMg01no075_f08.b1 MSMg01no075_f08.b1 CHROMAT_FILE:
MSMg01no075_f08.b1 PHD_FILE: MSMg01no075_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:58 2005
(469 letters)
>mm_chr7_100467403_100468272
Length = 870
Score = 864 bits (447), Expect = 0.0
Identities = 462/467 (98%), Gaps = 1/467 (0%)
Strand = Plus / Plus
Query: 4 ggaattcttttagtgtccttgtattgtggaaaatttctttctccttcagttatgtatagt 63
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttttagtgtgtttgtattgtggaaaatttctttctccttcagttatgtatagt 263
Query: 64 ttttgtttgtttattttaactttctcatttgatcagagtccagagagacatgaggtaaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ttttgtttgtttattttaactttctcatttgatcagagtccagagagacatgaggtaaag 323
Query: 124 atattagatccactctataaattatcatttcacagtgctgagaccttttgttcagaaatt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atattagatccactctataaattatcatttcacagtgctgagaccttttgttcagaaatt 383
Query: 184 tcatagggctagcataaatacctgctaagaagttaacatatgctgaaatgaattgtgctc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcatagggctagcataaatacctgctaagaagttaacatatgctgaaatgaattgtgctc 443
Query: 244 agtgggtatatagctttataagtcataattgtatactcatgtgttcttagaaaaaatt-g 302
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |
Sbjct: 444 agtgggtatatagctttataagccataattgtatactcatgtgttcttagaaaaaatttg 503
Query: 303 tactatagtatttttctgttttcattagtataatagaagatgactattattttcttatag 362
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 504 tactatagtatttttctgttttcattagtataatagaaaatgactattattttcttatag 563
Query: 363 cagacaaaagtgaattttctatattaatgatatcaactgtagagatgacatatttcattg 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cagacaaaagtgaattttctatattaatgatatcaactgtagagatgacatatttcattg 623
Query: 423 aaaggcattggacatagggcacagaacattagggttataataagata 469
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aaaggcattggacatagggcacagaacattagggttataataagata 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 469
Length of database: 870
Length adjustment: 10
Effective length of query: 459
Effective length of database: 860
Effective search space: 394740
Effective search space used: 394740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_f08.g1 MSMg01no075_f08.g1 CHROMAT_FILE:
MSMg01no075_f08.g1 PHD_FILE: MSMg01no075_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:23:58 2005
(222 letters)
>mm_chr7_100615308_100615929
Length = 622
Score = 387 bits (200), Expect = e-112
Identities = 215/220 (97%)
Strand = Plus / Minus
Query: 1 attcttgattcattcccccttcagatctcaagctgttctactatatgagatctaccagac 60
|||||||||||||||||||||||||||||||||||||| |||||||||||| || |||||
Sbjct: 420 attcttgattcattcccccttcagatctcaagctgttcaactatatgagatttagcagac 361
Query: 61 taccctcctgatagttcctaagaaagaaacacagagaccctacgcatgctacttagtttc 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 360 taccctcctgatagttcctaagaaagaaacacagagactctacgcatgctacttagtttc 301
Query: 121 tcctgatccctgcttaatatcttttgcatctgcgaaggcgtatgttcctgtcattacctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tcctgatccctgcttaatatcttttgcatctgcgaaggcgtatgttcctgtcattacctg 241
Query: 181 tatcttattatccaagatcattctttggagcatcttggtg 220
||||||||||||||||||||||||||| ||||||||||||
Sbjct: 240 tatcttattatccaagatcattctttgaagcatcttggtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 222
Length of database: 622
Length adjustment: 9
Effective length of query: 213
Effective length of database: 613
Effective search space: 130569
Effective search space used: 130569
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
