Query= MSMg01no078_a17.b1 MSMg01no078_a17.b1 CHROMAT_FILE:
MSMg01no078_a17.b1 PHD_FILE: MSMg01no078_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:14 2005
(665 letters)
>mm_chr7_143792548_143793614
Length = 1067
Score = 1241 bits (642), Expect = 0.0
Identities = 658/664 (99%), Gaps = 2/664 (0%)
Strand = Plus / Minus
Query: 4 ggaattcagatatcctcctatgctagctatgtctcttaagtgttattaaatatctttgag 63
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 675 ggaattcagatatcctcctatgctagctatgtcgcttaagtgttattaaatatctttgag 616
Query: 64 gccattttttattgatgagagtgactttatgctaatatcgacagaatagcactgcatcag 123
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 615 gccattttttattgatgagagtggctttatgctaatatcaacagaatagcactgcatcag 556
Query: 124 cctcccccatagactgcaggctgggtgaaggctggccgcagggttttcttcttcatgctt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cctcccccatagactgcaggctgggtgaaggctggccgcagggttttcttcttcatgctt 496
Query: 184 acatccacagcatcgagtgttgtacttgacatatggtaactagtgtgtaaatatttgacg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acatccacagcatcgagtgttgtacttgacatatggtaactagtgtgtaaatatttgacg 436
Query: 244 gaagacttaattaattcgtgag--tgttgtaagcagtgaaatcgataattaacatgaggg 301
||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct: 435 gaagacttaattaattcatgagtttgttgtaagcagtgaaatcgataattaacatgaggg 376
Query: 302 gcttggcatgcggaagctcttactatgcgctagctggatgcatatagctccaactcatga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gcttggcatgcggaagctcttactatgcgctagctggatgcatatagctccaactcatga 316
Query: 362 aggcttttggaggccggcgactaagtttgcttcactttgttctcagctctttccacacat 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aggcttttggaggccggcgactaagtttgcttcactttgttctcagctctttccacacat 256
Query: 422 aaatgcctgaagccattgaatcttgtgatcattgtagctgagaacaaagctccggcagaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 aaatgcctgaagccattgaatcttgtgatcattgtagctgagaacaaagctccggcagaa 196
Query: 482 agcaaaacaaatgaggtttcttccttcttggagcttatggccatccgtgtccaaattaga 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 agcaaaacaaatgaggtttcttccttcttggagcttatggccatccgtgtccaaattaga 136
Query: 542 gtaccagctaaccccacagccatttagcatccatatttaatagtaaaacaggctaaaagt 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gtaccagctaaccccacagccatttagcatccatatttaatagtaaaacaggctaaaagt 76
Query: 602 ttctgtttattgatcatttgttatgggatagccttgggtattttgtttaaaactatggta 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 ttctgtttattgatcatttgttatgggatagccttgggtattttgtttaaaactatggta 16
Query: 662 tcat 665
||||
Sbjct: 15 tcat 12
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1067
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1057
Effective search space: 692335
Effective search space used: 692335
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_a17.g1 MSMg01no078_a17.g1 CHROMAT_FILE:
MSMg01no078_a17.g1 PHD_FILE: MSMg01no078_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:15 2005
(571 letters)
>mm_chr7_143673261_143674231
Length = 971
Score = 1081 bits (559), Expect = 0.0
Identities = 568/571 (99%)
Strand = Plus / Plus
Query: 1 tttcattcttttctcccatgctccctgtcattgaccactagataaaacatggggtaaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcattcttttctcccatgctccctgtcattgaccactagataaaacatggggtaaact 260
Query: 61 ctccccatgagacaggaagaaacagacgagctagatagagcccactagagtttctactgg 120
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 ctccccatgagacaggaagaaacagacgagctagagagagcccactagagtttctactgg 320
Query: 121 aaaattttttgaaatgcctcacctgttcgtgggttggttcttaaaggataaggcaaaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaattttttgaaatgcctcacctgttcgtgggttggttcttaaaggataaggcaaaaaa 380
Query: 181 aagtccagtgttgctggtcatattttaaaattgaaaacataacctttttacatatattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtccagtgttgctggtcatattttaaaattgaaaacataacctttttacatatattaa 440
Query: 241 aaatagataaaaaggtagtttttcaagaaagttatgaattgactgtgtaagaaaactaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaatagataaaaaggtagtttttcaagaaagttatgaattgactgtgtaagaaaactaag 500
Query: 301 attccttggctcctaaggcacggcagagctgagacttgcattgggtacaggacttggagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attccttggctcctaaggcacggcagagctgagacttgcattgggtacaggacttggagg 560
Query: 361 gacacatattctagggctgtaatgtatgtcaataaacaacggagcacccaagcatggcca 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 561 gacacatattctagggctgtaatgtatgtcaataaacaacggagtacccaagcatggcca 620
Query: 421 agttgacgccttaccctccagtatggctgctcttaggaagggttcctgggtagcagtaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 agttgacgccttaccctccagtatggctgctcttaggaagggttcctgggtagcagtaga 680
Query: 481 caatggcattgtcacaggatacttccccagggacattcattctagaccaaacatacattc 540
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caatggcattgttacaggatacttccccagggacattcattctagaccaaacatacattc 740
Query: 541 tggacacttctagatagattggccctcgtct 571
|||||||||||||||||||||||||||||||
Sbjct: 741 tggacacttctagatagattggccctcgtct 771
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 571
Length of database: 971
Length adjustment: 10
Effective length of query: 561
Effective length of database: 961
Effective search space: 539121
Effective search space used: 539121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
