Query= MSMg01no078_a22.b1 MSMg01no078_a22.b1 CHROMAT_FILE:
MSMg01no078_a22.b1 PHD_FILE: MSMg01no078_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:16 2005
(657 letters)
>mm_chr7_74766908_74767959
Length = 1052
Score = 1207 bits (624), Expect = 0.0
Identities = 643/652 (98%), Gaps = 5/652 (0%)
Strand = Plus / Plus
Query: 6 gaattcaataaaacgcacatgcagaagagaaacagggcaaaacaaaacaaacaaacaaca 65
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcaataaaacgcacatgcataagagaaacagggcaaaacaaaacaaacaaacaaca 265
Query: 66 accaggcaaacaaccaaaacaggagaaaagctatcagctgaacagcacacaaagctctct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 accaggcaaacaaccaaaacaggagaaaagctatcagctgaacagcacacaaagctctct 325
Query: 126 ggactgagaggcatacattccagtgcactgccaagccctgcccttacccaggccaaccag 185
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ggaccaagaggcatacattccagtgcactgccaagccctgcccttacccaggccaaccag 385
Query: 186 agaaagtctagacagccgaggcctttgcaagagagctaacctatccttagatctgagatt 245
|||||| ||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 agaaagcctaga-----gaggcctttgcaagagagctaacctatccttagatctgagatt 440
Query: 246 gctcctagtctaagcaaaccatataagaaccaaacacaaatgccagcaaacacagcaaaa 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctcctagtctaagcaaaccatataagaaccaaacacaaatgccagcaaacacagcaaaa 500
Query: 306 acaaaaaagaaaagaaaatacattactatgtaagatttataaaactcaccatccaagtga 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaaaaaagaaaagaaaatacattactatgtaagatttataaaactcaccatccaagtga 560
Query: 366 tgaaaacaaccccaaactggaagaaaaaaaatcaatacaaataaacccactaagcaagtg 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgaaaacaaccccaaactggaagaaaaaaaatcaatacaaataaacccactaagcaagtg 620
Query: 426 attagcaaataaggacatttaaataattatagtgaccacagtcaggaagctagatgaaaa 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attagcaaataaggacatttaaataattatagtgaccacagtcaggaagctagatgaaaa 680
Query: 486 ttatgaacattgtaagaactataaaatttaaagaaaatgaaatgtctatagatcaaagat 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttatgaacattgtaagaactataaaatttaaagaaaatgaaatgtctatagatcaaagat 740
Query: 546 acctatatataaaatgagaatatataatatataaaatcactggatgaaattaacatagta 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 acctatatataaaatgagaatatataatatataaaatcactggatgaaattaacatagta 800
Query: 606 acttacctcaagggcagaaaaatagtttatcaaaactgaagcacaacacgaa 657
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 acttacctcaagggcagaaaaatagtttatcaaaactgaagcacaacacgaa 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 37
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1052
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1042
Effective search space: 674174
Effective search space used: 674174
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no078_a22.g1 MSMg01no078_a22.g1 CHROMAT_FILE:
MSMg01no078_a22.g1 PHD_FILE: MSMg01no078_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:16 2005
(162 letters)
>mm_chr7_74937433_74937994
Length = 562
Score = 263 bits (136), Expect = 4e-75
Identities = 148/152 (97%)
Strand = Plus / Minus
Query: 1 agttgaggtggaggtggctctcactcctctgactggagaacccctcctgctgttcttcac 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 agttggggtggaggtggctctcactcctctgactggagaacccctcctgctgttcttcac 293
Query: 61 agcccctggggctacttaccagcttccattacagagtctccttgaggagggaagctcact 120
|||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 292 agcccctggggctacttaccagtttccattacagagcctccttgaggagggaagctcact 233
Query: 121 ggcagagtaggtacttggagactggggggggg 152
||||||| ||||||||||||||||||||||||
Sbjct: 232 ggcagagcaggtacttggagactggggggggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 162
Length of database: 562
Length adjustment: 8
Effective length of query: 154
Effective length of database: 554
Effective search space: 85316
Effective search space used: 85316
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
