Query= MSMg01no080_a04.b1 MSMg01no080_a04.b1 CHROMAT_FILE:
MSMg01no080_a04.b1 PHD_FILE: MSMg01no080_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:47 2005
(376 letters)
>mm_chr7_36729195_36729970
Length = 776
Score = 638 bits (330), Expect = 0.0
Identities = 361/372 (97%), Gaps = 2/372 (0%)
Strand = Plus / Minus
Query: 5 ggaattcaatgtctgccctggttctgtatggaacactgcaatcgtaaacatgggtgtgca 64
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 ggaattcaatgtctggactggttctgtatggaacactgcaatcgtaaacatgggtgtgca 530
Query: 65 gttatctctgtgtcatgcttaaagtccttagggtaagtacccaggagtgctggatcgtac 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 529 gttatctctgtgtcatgcttaaagtccttagggtaagtacccaggagtgctggatcatac 470
Query: 125 catagttatatttttagctgaaccagaccaagaggcctgatctccctaccctgcctgcct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 catagttatatttttagctgaaccagaccaagaggcctgatctccctaccctgcctgcct 410
Query: 185 gccaccatttgctgtcttgttttcttgatgacaaccattttgattaatataagagcaaat 244
|||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct: 409 gccaccgtttgctgtcttgttttcttgatgacaaccattttgattgatgtaagagcaaat 350
Query: 245 gtccttttttttttacttttgcgagtcagagtctcatgtgggccaggctgcccatagtaa 304
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gtccttttttttttccttttgtgagtcagagtctcatgtgggccaggctgcccatagtaa 290
Query: 305 ggatgactttaacttctgatttcctaccccccacccttgctaagtgcagtgataggaatc 364
||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 289 ggatgacttaaacttctgatttcctacccccc--ccttgctaagtgcagtgataggaatc 232
Query: 365 aaacccagggtc 376
||||||||||||
Sbjct: 231 aaacccagggtc 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 376
Length of database: 776
Length adjustment: 9
Effective length of query: 367
Effective length of database: 767
Effective search space: 281489
Effective search space used: 281489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_a04.g1 MSMg01no080_a04.g1 CHROMAT_FILE:
MSMg01no080_a04.g1 PHD_FILE: MSMg01no080_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:28:47 2005
(532 letters)
>mm_chr7_36556692_36557620
Length = 929
Score = 967 bits (500), Expect = 0.0
Identities = 523/532 (98%), Gaps = 3/532 (0%)
Strand = Plus / Plus
Query: 1 tttgttttgagtcacttccagctgggagggcctgggatcctagggcacgaactgggggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgttttgagtcacttccagctgggagggcctgggatcctagggcacgaactgggggaa 260
Query: 61 gcaaacccagtgctgtagtcattagagcacctgtggcctctgcaaggaatcgactgtaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaaacccagtgctgtagtcattagagcacctgtggcctctgcaaggaatcgactgtaag 320
Query: 121 agattgtttggtgataggctacgagaggatcgaagtatgaggagcgttgtagtcggtggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agattgtttggtgataggctacgagaggatcgaagtatgaggagcgttgtagtcggtggc 380
Query: 181 cttcagcagttctaattacaggaagggagccggcacccccagctcagcactggaagcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttcagcagttctaattacaggaagggagccggcacccccagctcagcactggaagcatc 440
Query: 241 gtcatgtctgctgtggaagctaaaggactgttgaacaggggagaaggcccagagcccatg 300
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 gccatgtctgctgtggaagctaaagggctgttgaacaggggagaaggcccagagcccatg 500
Query: 301 cttgtgaaacgcagccctggcgcgtcagggctacctcagcaacttaacagagcctaacag 360
|||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 cttgtgaaacgcagccctggtgcgccagggctacctcagcaacttaacagagcctaacag 560
Query: 361 taaaccccaaccagctcccgggaagctttcagtggcttaaatgcaagtttctaactcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taaaccccaaccagctcccgggaagctttcagtggcttaaatgcaagtttctaactcaac 620
Query: 421 aaacccaagacaggaatacacgcagacagctaaggaaacttagaaacaagtggtttttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaacccaagacaggaatacacgcagacagctaaggaaacttagaaacaagtggtttttta 680
Query: 481 acaaaaaaaaaaatttattacccaaatacaatatttaagtcaatacctggca 532
|||||||||| ||||||||| ||||||||||||||||||||||| |||||
Sbjct: 681 acaaaaaaaa---tttattaccaaaatacaatatttaagtcaatacatggca 729
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 929
Length adjustment: 10
Effective length of query: 522
Effective length of database: 919
Effective search space: 479718
Effective search space used: 479718
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
