Query= MSMg01no080_d15.b1 MSMg01no080_d15.b1 CHROMAT_FILE:
MSMg01no080_d15.b1 PHD_FILE: MSMg01no080_d15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:04 2005
(397 letters)
>mm_chr7_142172686_142173482
Length = 797
Score = 706 bits (365), Expect = 0.0
Identities = 385/392 (98%), Gaps = 1/392 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaccttgc-cactatttaaatttaatatttaattttgttgctagtagtttaaaa 63
|||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcaaccaagcacactatttaaatttaatatttaattttgttgctagtagtttaaaa 263
Query: 64 tccctaatagatggcattaatgtagtttatcagccatgctgccttcagttttattttgtg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tccctaatagatggcattaatgtagtttatcagccatgctgccttcagttttattttgtg 323
Query: 124 cctttttatagtcttccctttggttcctcataaaataaggaaattatgatattttgtaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 cctttttatagtcttccctttggttcctcataaaataaggaaattatgatattttgtaaa 383
Query: 184 ttaaatgagtgaaaattaagcatatgttgaataaagacatcaagttattgaatttatccc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttaaatgagtgaaaattaagcatatgttgaataaagacatcaagttattgaatttatccc 443
Query: 244 tcccctttccgtgcttgtgtgtgtgtgttcacactcatgagtgctcgcatgcgtgcctgt 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcccctttccgtgcttgtgtgtgtgtgttcacactcatgagtgctcgcatgcgtgcctgt 503
Query: 304 gtgtgtacttccttctcttccctccccctccaaaccacccccttcctccttctcctgaca 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtgtgtacttccttctcttccctccccctccaaaccacccccttcctccttctcctgaca 563
Query: 364 tggcccccttttctgtggncttctaattcatg 395
||| |||||||||||| |||||||||||||
Sbjct: 564 tggtttccttttctgtggccttctaattcatg 595
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no080_d15.g1 MSMg01no080_d15.g1 CHROMAT_FILE:
MSMg01no080_d15.g1 PHD_FILE: MSMg01no080_d15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:29:04 2005
(125 letters)
>mm_chr7_142342331_142342855
Length = 525
Score = 234 bits (121), Expect = 1e-66
Identities = 121/121 (100%)
Strand = Plus / Minus
Query: 1 cttatgcagatggcagctttcccagggcttgctaccatgcactcaggactggcctaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cttatgcagatggcagctttcccagggcttgctaccatgcactcaggactggcctaagaa 262
Query: 61 atgttcattgctggtcttttgcttcctgagttctgactggaggtaggggagtttgaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgttcattgctggtcttttgcttcctgagttctgactggaggtaggggagtttgaaggg 202
Query: 121 g 121
|
Sbjct: 201 g 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 125
Length of database: 525
Length adjustment: 8
Effective length of query: 117
Effective length of database: 517
Effective search space: 60489
Effective search space used: 60489
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
