This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
Previous ver.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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Search Result
BAC
Clone Name
MSMg01-081L17
Chromosome
7 (Build37)
Map Location
37,548,378 - 37,548,816
singlet/doublet
singlet
Overlap gene
Tshz3
Upstream gene
zfp507
,
LOC100043872
,
EG668988
,
LOC668507
Downstream gene
LOC100043874
,
Zfp536
Link
Open Mouse BAC browser
Click to get alignment info.
name
zfp507
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:668501
MGI:1916378
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 123 ESTs, 3 Proteins
name
LOC100043872
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100043872
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 128 ESTs, 3 Proteins
name
EG668988
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:668988
MGI:3648375
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 Proteins
name
LOC668507
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:668507
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins
pseudo
: _no_value
name
Tshz3
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:243931
MGI:2442819
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100043874
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100043874
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 1 Protein
name
Zfp536
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:243937
MGI:1926102
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
zfp507
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:149256556
GeneID:668501
MGI:1916378
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 123 ESTs, 3 Proteins
product
: zinc finger protein 507
transcript_id
: XM_145521.10
name
LOC100043872
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149256728
GeneID:100043872
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 101 ESTs, 2 Proteins
product
: similar to Ac2-210, transcript variant 1
transcript_id
: XM_001481154.1
name
LOC100043872
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149256730
GeneID:100043872
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 123 ESTs, 2 Proteins
product
: similar to Ac2-210, transcript variant 2
transcript_id
: XM_001481155.1
name
EG668988
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:149256558
GeneID:668988
MGI:3648375
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 22 Proteins
product
: predicted gene, EG668988
transcript_id
: XM_001006666.2
name
Tshz3
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:118130038
GeneID:243931
MGI:2442819
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: teashirt zinc finger family member 3
transcript_id
: NM_172298.2
name
LOC100043874
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149256732
GeneID:100043874
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs, 1 Protein
product
: hypothetical protein LOC100043874
transcript_id
: XM_001481156.1
name
Zfp536
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:141801793
GeneID:243937
MGI:1926102
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: zinc finger protein 536
transcript_id
: NM_172385.2
name
zfp507
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:149256557
GeneID:668501
MGI:1916378
definition
codon_start
: 1
product
: zinc finger protein 507
protein_id
: XP_145521.8
name
LOC100043872
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149256729
GeneID:100043872
definition
codon_start
: 1
product
: similar to Ac2-210 isoform 1
protein_id
: XP_001481204.1
name
LOC100043872
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149256731
GeneID:100043872
definition
codon_start
: 1
product
: similar to Ac2-210 isoform 2
protein_id
: XP_001481205.1
name
EG668988
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:149256559
GeneID:668988
MGI:3648375
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_001006666.2
name
Tshz3
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:26986627
GeneID:243931
MGI:2442819
definition
GO_component
: GO:0005622 - intracellular [Evidence IEA]
GO_function
: GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
GO_process
: GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]
codon_start
: 1
note
: zinc finger protein 537
product
: teashirt 3
protein_id
: NP_758502.1
name
LOC100043874
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149256733
GeneID:100043874
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_001481206.1
name
Zfp536
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:27369509
CCDS:CCDS21156.1
GeneID:243937
MGI:1926102
definition
GO_component
: GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]
GO_function
: GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA]
codon_start
: 1
product
: zinc finger protein 536
protein_id
: NP_759017.1
name
LOC668507
(CDS detail)
type
exon
link
vega
ensembl
xref
GeneID:668507
definition
number
: 1
pseudo
: _no_value
clone name
MSMg01-537E18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-524A13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-333A09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-520P21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-075M22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-080A04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-079A08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-272J12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-451H12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-145F11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-517B11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-185L12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-540N11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-447L20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-429O20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-124F03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-076P02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-153A01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-312H20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-104G07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-395D13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-135P21
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-356M05
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-407M06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-475O04
singlet/doublet
doublet
plural/unique
plural
clone name
MSMg01-213I11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-271E23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-359M06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-290E03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-499H02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-459N02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-482K12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-172D11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-494O20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-323D15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-405C18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-323N05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-490B08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-354O19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-475E24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-472H12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-181A03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-496K12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-320G18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-354G20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-516M03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-299F14
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-122D17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-130G01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-523E11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-475O13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-159E22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-159F23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-468B03
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-426P23
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-337I22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-396K19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-300G19
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-518P03
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-455J13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-382F18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-392I13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-324F08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-406N06
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-473E12
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-126L11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-356B23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-363K01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-081L17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-082A15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-192M09
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-211A07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-216A07
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-185L11
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-466P06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-388E15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-392B12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-535L13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-521M16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-117C10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-183C01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-309A01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-165J20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-385K05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-511F11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-385L04
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-164L15
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-134F01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-309E01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-059P08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-315E17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-341D24
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-398D22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-365L20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-476H05
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-190D11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-329E18
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-237G06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-351N02
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-393A08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-329O24
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-530B08
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-073M22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-322J15
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-478O01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-340J05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-287C08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-121C20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-144J03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-286N03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-225L19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-322D21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-241G14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-074E23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-134I12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-254G19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-147O06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-176A10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-139M17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-332A23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-031A08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-208F14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-286M14
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-304B11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-335L04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-346A08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-201K03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-157P21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-118O18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-010F02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-251D14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-027I12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-252G23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-008O13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-162L05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-274G13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-330L23
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-070B06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-098E14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-273A09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-318A20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-247B08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-311O07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-182P22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-162K18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-104E08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-203C21
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-336H02
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-111N08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-146J16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-011I24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-246J16
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-135G05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-271I19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-292M22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-340A03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-119F19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-297P06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-236G04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-038H06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-206E02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-258O07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-102G24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-032K08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-043N01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-055J10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-087G13
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-135E24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-084H03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-186N22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-299N11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-062J17
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-220P19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-321D01
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-332A03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-018A03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-345H11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-038I14
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-109A16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-093B13
singlet/doublet
doublet
plural/unique
unique