MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-082B16
Chromosome	7 (Build37)
Map Location	74,455,484 - 74,455,872
singlet/doublet	singlet
Overlap gene	Mef2a
Upstream gene	Lrrk1, Aldh1a3, Asb7, Lins2, Lass3, Adamts17, Lysmd4
Downstream gene	EG665304, Lrrc28, Ttc23, Dmn, LOC665319, LOC100041771, Igf1r, C330024D12Rik, EG434197
Link	Open Mouse BAC browser

Click to get alignment info.

name	Lrrk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233328 MGI:2142227
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Aldh1a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56847 MGI:1861722
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:117589 MGI:2152835
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Lins2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72635 MGI:1919885
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lass3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:545975 MGI:2681008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 10 Proteins

name	Adamts17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233332 MGI:3588195
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lysmd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:75099 MGI:1922349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mef2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17258 MGI:99532
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG665304 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665304 MGI:3646750
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	Lrrc28 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67867 MGI:1915689
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ttc23 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67009 MGI:1914259
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dmn (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:233335 MGI:2661187
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	LOC665319 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:665319
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 21 Proteins pseudo : _no_value

name	LOC100041771 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041771
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Igf1r (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16001 MGI:96433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C330024D12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:78444 MGI:1925694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein

name	EG434197 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:434197 MGI:3644026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:56699426 GeneID:233328 MGI:2142227
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine-rich repeat kinase 1 transcript_id : NM_146191.3

name	Aldh1a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542122 GeneID:56847 MGI:1861722
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : aldehyde dehydrogenase family 1, subfamily A3 transcript_id : NM_053080.2

name	Asb7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:17978255 GeneID:117589 MGI:2152835
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 7 transcript_id : NM_080443.1

name	Asb7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801909 GeneID:117589 MGI:2152835
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing protein 7 transcript_id : NM_178236.3

name	Lins2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22779908 GeneID:72635 MGI:1919885
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lines homolog 2 (Drosophila) transcript_id : NM_152815.1

name	Lass3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149257505 GeneID:545975 MGI:2681008
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 mRNAs, 2 ESTs, 10 Proteins product : longevity assurance homolog 3 (S. cerevisiae) transcript_id : XM_620510.3

name	Adamts17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142378418 GeneID:233332 MGI:3588195
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ADAM metallopeptidase with thrombospondin type 1 motif, 17 transcript_id : NM_001033877.2

name	Lysmd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142384938 GeneID:75099 MGI:1922349
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LysM, putative peptidoglycan-binding, domain containing 4 transcript_id : NM_175215.3

name	Mef2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76253933 GeneID:17258 MGI:99532
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : myocyte enhancer factor 2A transcript_id : NM_001033713.1

name	EG665304 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380553 GeneID:665304 MGI:3646750
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : predicted gene, EG665304 transcript_id : XM_975980.1

name	Lrrc28 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142366563 GeneID:67867 MGI:1915689
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat containing 28 transcript_id : NM_175124.4

name	Ttc23 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31981131 GeneID:67009 MGI:1914259
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetratricopeptide repeat domain 23 transcript_id : NM_025905.2

name	Dmn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734484 GeneID:233335 MGI:2661187
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : desmuslin transcript_id : NM_183312.2

name	Dmn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46849775 GeneID:233335 MGI:2661187
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : desmuslin transcript_id : NM_207663.2

name	Dmn (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:42734398 GeneID:233335 MGI:2661187
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : desmuslin transcript_id : NM_201639.1

name	Igf1r (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:112983655 GeneID:16001 MGI:96433
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : insulin-like growth factor I receptor transcript_id : NM_010513.2

name	C330024D12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94380559 GeneID:78444 MGI:1925694
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 3 ESTs, 1 Protein product : RIKEN cDNA C330024D12 gene transcript_id : XM_133560.6

name	EG434197 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126506292 GeneID:434197 MGI:3644026
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG434197 transcript_id : NM_001013811.2

name	Lrrk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:56699427 CCDS:CCDS21344.1 GeneID:233328 MGI:2142227
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005525 - GTP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0030145 - manganese ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA] GO_process : GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : leucine-rich repeat kinase 1 protein_id : NP_666303.3

name	Aldh1a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542123 CCDS:CCDS21345.1 GeneID:56847 MGI:1861722
definition	GO_function : GO:0004028 - 3-chloroallyl aldehyde dehydrogenase activity [Evidence TAS]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0048048 - embryonic eye morphogenesis [Evidence IMP] [Evidence IGI]; GO:0002072 - optic cup morphogenesis (sensu Mammalia) [Evidence IGI]; GO:0043065 - positive regulation of apoptosis [Evidence IMP] [Evidence IGI]; GO:0042573 - retinoic acid metabolism [Evidence IMP] [Evidence IGI] codon_start : 1 exception : mismatches in translation note : aldehyde dehydrogenase-6; retinaldehyde dehydrogenase 3 product : aldehyde dehydrogenase family 1, subfamily A3 protein_id : NP_444310.2

name	Asb7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:17978256 CCDS:CCDS21346.1 GeneID:117589 MGI:2152835
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 exception : mismatches in translation note : isoform 1 is encoded by transcript variant 1 product : ankyrin repeat and SOCS box-containing protein 7 isoform 1 protein_id : NP_536691.1

name	Asb7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30141906 GeneID:117589 MGI:2152835
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : ankyrin repeat and SOCS box-containing protein 7 isoform 2 protein_id : NP_839954.1

name	Lins2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22779909 CCDS:CCDS21348.1 GeneID:72635 MGI:1919885
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : Wins2 protein with Drosophila Lin homologous domain; protein with Drosophila Lines homologous domain; protein with Drosophila Lines (Lin) homologous domain product : Wins2 protein protein_id : NP_690028.1

name	Lass3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82906357 GeneID:545975 MGI:2681008
definition	codon_start : 1 product : similar to longevity assurance 3-like protein protein_id : XP_620510.2

name	Adamts17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702169 CCDS:CCDS21349.1 GeneID:233332 MGI:3588195
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 note : disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 17 product : ADAM metallopeptidase with thrombospondin type 1 motif, 17 protein_id : NP_001029049.1

name	Lysmd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30424844 CCDS:CCDS21350.1 GeneID:75099 MGI:1922349
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] codon_start : 1 product : LysM, putative peptidoglycan-binding, domain containing 4 protein_id : NP_780424.1

name	Mef2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:76253934 GeneID:17258 MGI:99532
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] [Evidence IC] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] [Evidence IDA]; GO:0016563 - transcriptional activator activity [Evidence IDA] GO_process : GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IDA] [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : myocyte enhancer factor 2A protein_id : NP_001028885.1

name	EG665304 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94380554 GeneID:665304 MGI:3646750
definition	codon_start : 1 product : hypothetical protein protein_id : XP_981074.1

name	Lrrc28 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31541886 CCDS:CCDS21351.1 GeneID:67867 MGI:1915689
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : leucine rich repeat containing 28 protein_id : NP_780333.2

name	Ttc23 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981132 CCDS:CCDS21352.1 GeneID:67009 MGI:1914259
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : tetratricopeptide repeat domain 23 protein_id : NP_080181.2

name	Dmn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46559834 GeneID:233335 MGI:2661187
definition	GO_component : GO:0005882 - intermediate filament [Evidence IEA] [Evidence ISS]; GO:0030018 - Z disc [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0030674 - protein binding, bridging [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : unclassified translation discrepancy note : isoform M is encoded by transcript variant 2 product : desmuslin isoform M protein_id : NP_997546.1

name	Dmn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42734399 GeneID:233335 MGI:2661187
definition	GO_component : GO:0005882 - intermediate filament [Evidence IEA] [Evidence ISS]; GO:0030018 - Z disc [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0030674 - protein binding, bridging [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : unclassified translation discrepancy note : isoform H is encoded by transcript variant 1 product : desmuslin isoform H protein_id : NP_964001.1

name	Dmn (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:42734485 GeneID:233335 MGI:2661187
definition	GO_component : GO:0005882 - intermediate filament [Evidence IEA] [Evidence ISS]; GO:0030018 - Z disc [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence ISS]; GO:0030674 - protein binding, bridging [Evidence ISS]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 exception : mismatches in translation note : isoform L is encoded by transcript variant 3 product : desmuslin isoform L protein_id : NP_899135.2

name	Igf1r (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:112983656 CCDS:CCDS21355.1 GeneID:16001 MGI:96433
definition	EC_number : 2.7.10.1 GO_component : GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005006 - epidermal growth factor receptor activity [Evidence IEA]; GO:0043560 - insulin receptor substrate binding [Evidence ISS]; GO:0005520 - insulin-like growth factor binding [Evidence IPI] [Evidence ISS]; GO:0005010 - insulin-like growth factor receptor activity [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0043548 - phosphoinositide 3-kinase binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0004672 - protein kinase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0004714 - transmembrane receptor protein tyrosine kinase activity [Evidence IEA] GO_process : GO:0006916 - anti-apoptosis [Evidence ISS]; GO:0007420 - brain development [Evidence IMP]; GO:0048009 - insulin-like growth factor receptor signaling pathway [Evidence ISS] [Evidence IC]; GO:0030238 - male sex determination [Evidence IMP]; GO:0009887 - organ morphogenesis [Evidence IMP]; GO:0008284 - positive regulation of cell proliferation [Evidence ISS]; GO:0046777 - protein amino acid autophosphorylation [Evidence ISS]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA]; GO:0051262 - protein tetramerization [Evidence ISS]; GO:0000074 - regulation of progression through cell cycle [Evidence ISS]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence IEA] codon_start : 1 note : line 186 product : insulin-like growth factor I receptor protein_id : NP_034643.2

name	C330024D12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:20832761 GeneID:78444 MGI:1925694
definition	codon_start : 1 product : hypothetical protein LOC78444 protein_id : XP_133560.1

name	EG434197 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62000668 GeneID:434197 MGI:3644026
definition	codon_start : 1 exception : unclassified translation discrepancy product : hypothetical protein LOC434197 protein_id : NP_001013833.1

name	LOC665319 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665319
definition	number : 8 pseudo : _no_value

name	LOC665319 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665319
definition	number : 7 pseudo : _no_value

name	LOC665319 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665319
definition	number : 6 pseudo : _no_value

name	LOC665319 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665319
definition	number : 5 pseudo : _no_value

name	LOC665319 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665319
definition	number : 4 pseudo : _no_value

name	LOC665319 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665319
definition	number : 3 pseudo : _no_value

name	LOC665319 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665319
definition	number : 2 pseudo : _no_value

name	LOC665319 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:665319
definition	number : 1 pseudo : _no_value

name	LOC100041771 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100041771
definition	number : 1 pseudo : _no_value

clone name	MSMg01-366G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441P13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-298B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455M17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-266A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502G22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175H03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543J22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-529O12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-483D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-170C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446C04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-081I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460B08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104P03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170B21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068K17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-364B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-098O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-171L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-313D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-058E17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-460K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-343L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329M12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-519B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460L03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078A23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537N07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503M16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-450N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-404A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431B10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-530I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-097K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486A16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-098A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218D23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-543A03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147M12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-403N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-190J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-103J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309F22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-238L01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-144M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-223H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-102N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049H14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-088J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116F11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-011I01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-010L19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106J06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167H10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-165J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-141J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198M07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293J11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-209F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136C13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156P19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-082K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-122C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-067A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094A06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028J04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028J12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-329A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212O19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-167B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303E18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-258N07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001C03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338M11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-137A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-114D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186F01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-044F18
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-082B16.T7 (MSMg01no082_b16.b1)	MSMg01-082B16.TJ (MSMg01no082_b16.g1)
ACC	AG302551	AG302552
length	697	538
length of high quality (start - end)	391 (45 - 435)	---
definition	CHROMAT_FILE: MSMg01no082_b16.b1 PHD_FILE: MSMg01no082_b16.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:31:30 2005	CHROMAT_FILE: MSMg01no082_b16.g1 PHD_FILE: MSMg01no082_b16.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:31:30 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA ATTCATTAAGGCACCACACACACAAACTCACACTTTTGATAACATAAAAA CATGAAAAGAAAAAACAACTTAATTCAGATTAAAATTAGTTACTATTGCT TGTCTACTACTCTACAAGAATGGGCTAAATGGAAAGGGTAATTCCAAGAA CTAGTACAGACTTGAAGTAGCTAGAATCACACTGCTAGCTAAATATAAAT TAGGCACAAACACGTTAGAAAGCTCTTGTCAAATCAGGTAACTACAGAGG TTAAGTACTTCGGGTAAGGGACCAGGGTGGAGGAGGAGACCTCTCAAGGA AGGGGAAAAAGAACAGTCTCAAGAAGAGATCAAGAGGATACTAGAATAGC TTTGGGGGGGGGGGTAAAGGAGGAAATATGGGGAGGTTTCTTCTCCCTTC TTTCCGTGCTCTTTATTTCTGTATTTTTCTTCTCTCAAAGTGTACACATT TACATTGAGTTGTACTCATCTACTGCATTTCTAGATTATATTTCATATGC GTTCGCACTCTTTAGTAATCAACTTATGTCCCATACTCTTAACTTTCCTA TCTTCTACTTCTCATGCTTTTAGCTACATATATAATCATTTACCCTCATC ACCCTCCCTCCTCCTTATCCTCTCAGTCTCCTCTTGCTCCTGTTTCG	GGGGTTGGGGTGAGTGANTTNNNGGGGGGGTGGGTATTANNNAATATGNN NNNCCGATGTATGGTAGCCTGGGGCCGCCTGTCGAAAAAATTTAGGTGAA ACTATTGAAATTACCCCGGGGGGAAATTTTCCACAANNTGGTTGGGGAAA AAAAAAAATTTTGGGAGNCCCTTCTTTTTCCCTCTAAAAAAAAGGGATTG GGAAATTTTGGGGCATCCCCCTTAAAAGGGGGGACAAATGGGGGGCCCCT TTTTTTTTTACACCCTTTTTTGAAAAAAAAAAAGGGGGGGGGGGGGTTAA AATAAAAAGAGGGGGGGGGGTACCCTTTTTGGGGGGGTATTTAAAATAAA AGTGGGGGGGGGAAAAAATTTTTCTGTTTTTTGTTGGGGGGGGGTCTTGG TTTATATATTAAAGTGCAAAAAAACCCCCTTGGTGTTGAAAAAAAAAACA ACCCTTTTTTTTTGAGTGGGGCGCCCTAAGAGAAAAAAAATATCATCTTT TTTTTTTTTATCTGCTCAAATTGTGGGTTTTTGTGGGT
quality values	Open. Hide. 6 6 6 6 6 9 17 30 25 16 13 13 10 12 19 25 27 30 31 31 33 33 33 43 26 19 14 14 14 10 17 11 15 12 12 12 12 15 15 23 22 28 21 24 28 34 44 48 36 36 36 36 31 30 28 28 26 25 12 8 8 7 6 9 10 22 22 30 31 31 31 31 31 36 36 36 36 38 36 36 37 37 37 47 57 53 50 50 50 50 47 47 47 47 47 47 68 68 51 51 47 47 50 50 68 68 68 68 68 68 68 68 68 68 51 50 50 50 51 68 68 68 68 46 46 46 46 46 46 50 57 57 68 68 68 68 50 50 50 51 51 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 51 51 68 57 57 50 46 46 48 46 48 68 68 68 68 50 50 51 50 50 68 68 68 51 50 57 57 57 57 57 57 57 68 57 57 57 57 68 57 57 68 68 68 68 57 57 57 57 57 68 57 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 68 68 68 68 68 62 62 62 62 62 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 59 59 57 57 43 38 38 32 17 17 17 19 21 32 32 43 50 57 57 52 52 57 57 57 57 57 57 57 57 57 57 68 57 68 68 68 68 57 57 57 57 57 57 57 57 57 57 50 48 48 48 57 57 57 57 48 48 48 57 47 57 57 57 57 57 48 48 48 57 57 57 57 57 48 57 57 57 57 57 57 57 57 46 42 37 46 46 50 50 68 59 59 59 59 57 59 54 54 54 59 59 57 47 46 43 43 57 59 59 59 48 48 48 46 46 43 43 39 37 33 28 28 24 24 15 15 10 11 8 8 8 6 6 10 10 10 8 8 8 8 8 9 10 13 10 10 11 11 8 8 8 8 10 10 10 13 10 8 10 10 8 10 9 6 8 8 8 8 6 6 10 10 10 8 9 9 12 8 8 8 8 8 8 8 10 10 12 12 11 11 12 12 10 8 8 6 6 8 8 8 8 8 8 8 8 8 8 8 8 8 8 9 9 10 10 10 9 8 9 10 8 8 8 8 8 8 10 8 8 8 9 10 11 8 8 8 8 6 6 8 8 8 6 6 8 8 9 10 10 11 11 11 10 10 10 9 9 9 10 8 8 7 7 8 8 9 9 9 10 10 8 8 8 8 8 8 8 8 10 9 11 11 12 10 9 8 10 10 10 9 9 8 8 6 6 8 6 6 8 8 8 8 8 10 6 7 8 10 17 15 8 8 6 6 8 7 7 10 10 10 10 10 8 10 8 8 8 12 12 10 9 9 11 13 11 10 8 8 9 10 10 10 10 8 7 7 8 8 8 8 10 10 10 10 16 11 13 13 15 21 22 13 9 8 8 8 8 10 10 10 9 10 15 13 12 12 10 10 10 9 9 8 8 8 7 8 7	Open. Hide. 6 6 6 6 6 6 6 6 7 7 8 8 8 8 8 8 3 0 3 3 0 0 0 3 11 10 10 8 8 8 8 8 8 6 8 6 6 6 3 0 0 0 3 10 8 8 8 3 0 0 0 0 0 3 6 7 10 9 7 10 8 8 8 8 8 9 11 21 8 8 8 8 15 11 8 8 8 8 8 6 8 8 6 9 8 8 8 8 8 8 13 16 14 19 16 9 9 8 10 8 8 8 21 17 8 8 8 8 8 8 8 8 8 8 8 10 7 9 7 7 7 11 12 7 6 6 6 6 6 8 6 6 8 6 6 3 0 0 3 6 8 8 8 6 6 8 8 8 8 8 8 8 13 15 14 11 8 8 8 10 12 14 10 10 10 10 3 0 3 6 8 8 8 8 12 9 9 9 8 8 8 8 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 8 13 15 19 21 16 14 14 11 9 8 8 8 8 8 8 10 9 6 6 6 6 8 8 10 8 14 8 8 8 8 8 8 8 8 8 9 9 10 15 10 8 8 8 9 9 10 10 11 11 10 10 10 10 10 8 8 8 6 6 6 10 8 11 11 11 15 12 10 8 8 8 8 8 8 12 10 10 10 9 9 9 9 9 14 19 17 11 11 10 10 10 8 10 8 10 8 8 8 8 8 8 8 9 9 10 9 9 9 10 10 18 17 17 9 9 8 8 8 8 8 6 6 6 8 8 8 6 6 8 8 9 8 8 8 8 8 6 6 6 6 8 8 9 9 9 9 9 8 8 6 6 8 8 18 17 13 9 10 9 9 9 10 11 10 15 13 13 12 9 9 9 9 11 12 10 10 8 8 8 8 10 10 10 16 16 15 13 13 11 11 10 9 9 8 8 8 8 10 8 8 6 6 8 8 8 8 9 9 10 10 10 9 9 9 10 11 19 19 19 10 10 8 8 12 10 10 9 9 8 8 8 8 8 8 10 10 9 8 8 8 8 12 10 10 8 8 8 8 8 9 9 9 9 9 11 18 21 20 23 11 11 11 11 11 16 21 6 6 6 6 8 6 9 9 8 8 8 8 8 8 10 10 10 13 15 8 8 8 8 8 8 10 10 10 10 10 12 14 13 15 9 9 10 8 10 8 8 8 8 8 8 6 6 8 8 8 6 8 8 10 10 10 8 11 11 10 10 12 11 11 9 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no082_b16.b1 MSMg01no082_b16.b1 CHROMAT_FILE:
MSMg01no082_b16.b1 PHD_FILE: MSMg01no082_b16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:30 2005
         (391 letters)



>mm_chr7_74455280_74456072
          Length = 793

 Score =  729 bits (377), Expect = 0.0
 Identities = 386/389 (99%), Gaps = 2/389 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattaaggcac-cacacacacaaactcacacttttgataacataaaaacatgaaa 63
           ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattaagggacacacacacacaaactcacacttttgataacataaaaacatgaaa 264

                                                                       
Query: 64  agaaaaaacaacttaattcagattaaaattagttactattgcttgtctactactctacaa 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agaaaaaacaacttaattcagattaaaattagttactattgcttgtctactactctacaa 324

                                                                       
Query: 124 gaatgggctaaatggaaagggtaattccaagaactagtacagacttgaagtagctagaat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gaatgggctaaatggaaagggtaattccaagaactagtacagacttgaagtagctagaat 384

                                                                       
Query: 184 cacactgctagctaaatataaattaggcacaaacacgttagaaagctcttgtcaaatcag 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cacactgctagctaaatataaattaggcacaaacacgttagaaagctcttgtcaaatcag 444

                                                                       
Query: 244 gtaactacagaggttaagtacttcgggtaagggaccagggtggaggaggagacctctcaa 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gtaactacagaggttaagtacttcgggtaagggaccagggtggaggaggagacctctcaa 504

                                                                       
Query: 304 ggaaggggaaaaagaacagtctcaagaagagatcaagaggatactagaatagctttgggg 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggaaggggaaaaagaacagtctcaagaagagatcaagaggatactagaatagctttgggg 564

                                        
Query: 364 ggggggg-taaaggaggaaatatggggag 391
           ||||||| |||||||||||||||||||||
Sbjct: 565 ggggggggtaaaggaggaaatatggggag 593


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 793
Length adjustment: 9
Effective length of query: 382
Effective length of database: 784
Effective search space:   299488
Effective search space used:   299488
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information