Query= MSMg01no084_e24.b1 MSMg01no084_e24.b1 CHROMAT_FILE:
MSMg01no084_e24.b1 PHD_FILE: MSMg01no084_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:18 2005
(106 letters)
>mm_chr7_93947694_93948199
Length = 506
Score = 190 bits (98), Expect = 3e-53
Identities = 101/102 (99%)
Strand = Plus / Minus
Query: 5 gaattcataggcaatgcacataccacaataatttttacacttgtttattttacacagttc 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 gaattcataggcaatgcaaataccacaataatttttacacttgtttattttacacagttc 247
Query: 65 atctcttttgatttttatatttgaggctatccaaaattgaat 106
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atctcttttgatttttatatttgaggctatccaaaattgaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 106
Length of database: 506
Length adjustment: 8
Effective length of query: 98
Effective length of database: 498
Effective search space: 48804
Effective search space used: 48804
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no084_e24.g1 MSMg01no084_e24.g1 CHROMAT_FILE:
MSMg01no084_e24.g1 PHD_FILE: MSMg01no084_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:19 2005
(603 letters)
>mm_chr7_93880647_93881649
Length = 1003
Score = 988 bits (511), Expect = 0.0
Identities = 515/517 (99%), Gaps = 2/517 (0%)
Strand = Plus / Plus
Query: 89 ttttagaattagaacatataaaattgcaccaagagtgtttaataagttgaacatcactaa 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 ttttagaattagaacatataaaattgcaccaagagtgtttaataagttgaacatcactaa 346
Query: 149 ggttccatagttatttaagttcaatggaagaatctttggaatgttttatacctaatacct 208
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 ggttccatagttatttaagttcaatggaagaatctttggaatgttttatacctaatacct 406
Query: 209 aagtgtaatagtttaaaacatttgaaatgtaaataaagaaaatatctaaaaaataaaaaa 268
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aagtgtaatagtttaaaacatttgaaatgtaaataaagaaaatatctaaaaaataaaaaa 466
Query: 269 tattttaaaaatataaaaatttattgaac--ttacaatatttaatagtttgtataaaaat 326
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 467 tattttaaaaatataaaaatttattgaacacttacaatatttaatagtttgtataaaaat 526
Query: 327 gtagaggttcatgtagtatatactgtaataaatgtatccattaattattatatatacaca 386
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gtagaggttcatgtagtatatactgtaataaatgtatccattaattattatatatacaca 586
Query: 387 agttagatttatttcacattagaagagaattagaagatatatctatatcttaacaaataa 446
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 agttagatttatttcacattagaagagaattagaagatatatctatatcttaacaaataa 646
Query: 447 gataggaataaagaaaaaaattattttattcacatttataaactcacttcctttttctta 506
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 gataggaataaagaaaaaaattattttattcacatttataaactcacttcctttttctta 706
Query: 507 aggaacataaatttaaaagaacaatactatattattaaaaatatgtctatcaaataaaca 566
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 aggaacataaatttaaaagaacaatactatattattaaaaatatgtctatcaaataaaca 766
Query: 567 tatttaaataatagcaaaaactctcttcaaacaaaga 603
|||||||||||||||||||||||||||||||||||||
Sbjct: 767 tatttaaataatagcaaaaactctcttcaaacaaaga 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
