Query= MSMg01no084_n08.b1 MSMg01no084_n08.b1 CHROMAT_FILE:
MSMg01no084_n08.b1 PHD_FILE: MSMg01no084_n08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:58 2005
(663 letters)
>mm_chr7_50970380_50971442
Length = 1063
Score = 1096 bits (567), Expect = 0.0
Identities = 642/681 (94%), Gaps = 25/681 (3%)
Strand = Plus / Plus
Query: 5 gaattcagcaaatttgcttagtttcctgtttttctctatttatattatttatttacttat 64
||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 205 gaattcagcaattttgcttagtttcctgtttttctttatttatattatttatttacttat 264
Query: 65 ttgtgggtgtgtgta--catgaatgtgtggtttattggcgagagatatagcttagaggtc 122
||||| |||||||| |||||||||| |||||||||||| |||||||||||||| ||||
Sbjct: 265 ttgtg--tgtgtgtatgcatgaatgtgcggtttattggcgggagatatagcttaggggtc 322
Query: 123 tagtgcttttctagtatgtttgaggtaaggctttagggtcaatccctaggactataaata 182
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 323 tagtgcttttctagtatgtttgaggtaaggctttaggatcaatccctaggactataaata 382
Query: 183 ttgtaatatatccttagtacactaatgttcacttggatattatataatctatgttaatgt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttgtaatatatccttagtacactaatgttcacttggatattatataatctatgttaatgt 442
Query: 243 atataatgtatataatatataatgtatgtgtatatacatatgtatatatacatgaaaaca 302
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 443 atataatgtatataatatataatgtatgtgtatacacatatgtatatatacatgaaaaca 502
Query: 303 aaacagtctgcttatttgttgaaccacctcaaattggggatacagtttccttttagtttc 362
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 503 aaacagtctgcttatttgttgaaccacctcaaattggggatacaggttccttttagtttc 562
Query: 363 cctcctttcttcctttcctgccctcttccctactttcttgcagtactgagaatcggtcac 422
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct: 563 cctcctttcttcctttcctgccctcttccccactttcttgcagtactgagaatcggtcgc 622
Query: 423 agagacccatgagaactaaggaagcctgtatgactgacctgtattcccgggcctcttttt 482
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 623 agagacccatgagaactaaggaagcctgtatgactgacctacattcccgggcctcttttt 682
Query: 483 actttttttccagatagagtctcagtaagctccttaggtcaactttgaacttctgtaccc 542
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 683 actttttttccagatagagtctcagtaagctcctcaggtcagctttgaacttctgtaccc 742
Query: 543 taggcaggtcttaaatttgcaatctttcctgtgttagtttcccaaggagctgggctgaca 602
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 743 taggcaggtcttaaatttgcaatctt-cctgtgttagtttcccaaggagctgggctgaca 801
Query: 603 agcctttgccaccaagcttgacttaattggcttttttt--------------------ga 642
|||||||||||||||||||||||||||||||||||||| ||
Sbjct: 802 agcctttgccaccaagcttgacttaattggcttttttttttttttttttttttttttgga 861
Query: 643 gttctgtaaaattgctactaa 663
|||||||||||||||||||||
Sbjct: 862 gttctgtaaaattgctactaa 882
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_n08.g1 MSMg01no084_n08.g1 CHROMAT_FILE:
MSMg01no084_n08.g1 PHD_FILE: MSMg01no084_n08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:34:58 2005
(484 letters)
>mm_chr7_51022751_51023634
Length = 884
Score = 594 bits (307), Expect = e-174
Identities = 316/319 (99%)
Strand = Plus / Minus
Query: 166 cctctgaaaatagccaagtcttttaactcctgagccatctctccagtaccctgaatttgt 225
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 cctctgaaaatagccaagtcttttaactcctgagccatctctccagtaccctgaatttgg 825
Query: 226 ttttgatcttgtttatttgttttgttttttgagacagggtcttgccagccctagtgagtc 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 ttttgatcttgtttatttgttttgttttttgagacagggtcttgccagccctagtgagtc 765
Query: 286 ctggttcttgctatggagcccaggctatcctcaaactcaggcaacgctcctgcctcagcc 345
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 ctggttcttgctatggagcccaggctatcctcaaactcaggcaacgctcctgcctcagcc 705
Query: 346 tcctgagtgttgtgatcacacatattaatgcctagatggagtgttaagacctagataact 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 tcctgagtgttgtgatcacacatattaatgcctagatggagtgttaagacctagataact 645
Query: 406 gttacctggatagcttgcctcatatgtttctgctgttactaggaaactttctaatgctaa 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 644 gttacctggatagcttgcctcatatgtttctgctgttactaggaaactttctaatactaa 585
Query: 466 gtcgattacgtattcctgt 484
||| |||||||||||||||
Sbjct: 584 gtcaattacgtattcctgt 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 884
Length adjustment: 10
Effective length of query: 474
Effective length of database: 874
Effective search space: 414276
Effective search space used: 414276
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
