Query= MSMg01no085_l14.b1 MSMg01no085_l14.b1 CHROMAT_FILE:
MSMg01no085_l14.b1 PHD_FILE: MSMg01no085_l14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:52 2005
(490 letters)
>mm_chr7_31269123_31270011
Length = 889
Score = 785 bits (406), Expect = 0.0
Identities = 460/482 (95%), Gaps = 9/482 (1%)
Strand = Plus / Minus
Query: 14 ggaattcaactttcaacacccaaccacttaagtcttcctgggttacagcctcatgcgttc 73
|||||||||||||||||||||||| | | |||||||||||||||||||||||||||||||
Sbjct: 550 ggaattcaactttcaacacccaacta-taaagtcttcctgggttacagcctcatgcgttc 492
Query: 74 acatatccttgtgctgtgactgtctctaacctacaaaagcgatgaatagctcaggggaag 133
|||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 acatatgcatgtgctgtgactgtctctaacctacaaaagcgatgaatagctcaggggaag 432
Query: 134 gccatatgtccccagaagcccgaaatattcgctctgtggaccctgtgcagccacatcctg 193
||||||||||||||||||||||||||||| | |||||||||||| |||||||||||||||
Sbjct: 431 gccatatgtccccagaagcccgaaatatttgttctgtggaccctatgcagccacatcctg 372
Query: 194 cagattccacccccgttttctggggaattacgttccagcaccatggacagcgtctcagca 253
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 cagattccaccccggttttctggggaattacgttccagcaccatggacagcgtctcagca 312
Query: 254 gctccgtcccaggagccaggacagcgtctgagacattgttaccagagatgctggcgcatt 313
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 311 gctccgtcccaggagccaggacagcgtctgagacattgttaccagagatgctggagcatt 252
Query: 314 ggtggggcccaggggagagtctggctctttgtcttgtt-----ggatttcttttcttttt 368
|||| ||||||||||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct: 251 ggtgaggcccaggggagagtctggctctttgttttgttttgttggatttcttttcttctt 192
Query: 369 cttcttctcctcctccccatgcccctcctcctcctcctcttcctccttttcttggagaca 428
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 191 cttcttctcctcctccccatgcccctcctcctcctc---ttcctccttttcttggagaca 135
Query: 429 tagtctttctgtgtagcccaggctgccctttaactcccagccctgagtgctgagtgtggg 488
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 134 tagtctttctgtgtagcccaggctgccctttaactcccagtcctgagtgctgagtgtggg 75
Query: 489 ga 490
||
Sbjct: 74 ga 73
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 490
Length of database: 889
Length adjustment: 10
Effective length of query: 480
Effective length of database: 879
Effective search space: 421920
Effective search space used: 421920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no085_l14.g1 MSMg01no085_l14.g1 CHROMAT_FILE:
MSMg01no085_l14.g1 PHD_FILE: MSMg01no085_l14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:36:52 2005
(433 letters)
>mm_chr7_31252598_31253430
Length = 833
Score = 822 bits (425), Expect = 0.0
Identities = 431/433 (99%)
Strand = Plus / Plus
Query: 1 tccataaagggcaagctgtacccacctccatactattctggacacctgaaagacactcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccataaagggcaagctgtacccacctccatactattctggacacctgaaagacactcct 260
Query: 61 cctccctgagatctgtcccccctcacccgctaagtttcttcatcaagcacctatctccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctccctgagatctgtcccccctcacccgctaagtttcttcatcaagcacctatctccca 320
Query: 121 atagatgctcccaccatccgtgccctgaaggaccctactgaggtgaatgttgggggttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagatgctcccaccatccgtgccctgaaggaccctactgaggtgaatgttgggggttct 380
Query: 181 gtggatatagtctgcaccgtcgatgccaatcccatcctcccagagatgttcagctgggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtggatatagtctgcaccgtcgatgccaatcccatcctcccagagatgttcagctgggag 440
Query: 241 agactggtaagcacctagcctttggtggacggaggttgagctaggaagatgcagtctcgg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 agactggtaagcacctagcctttggtggacggaggttgagctaggaagatgcagtctccg 500
Query: 301 ggttgctagcgccttggaagtggatgttgcactgtgtgaagccctgtgtgactgtacagg 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 501 ggttgctagcgccttggaagtggatgttgcactgtgtgaagccatgtgtgactgtacagg 560
Query: 361 tcagggtatcttctgggaactgattttgttgaatggcaggtgaatgtgtgaatgagtgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagggtatcttctgggaactgattttgttgaatggcaggtgaatgtgtgaatgagtgaa 620
Query: 421 tagtgtgtgtgtg 433
|||||||||||||
Sbjct: 621 tagtgtgtgtgtg 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
