Query= MSMg01no085_o03.b1 MSMg01no085_o03.b1 CHROMAT_FILE:
MSMg01no085_o03.b1 PHD_FILE: MSMg01no085_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:16 2005
(500 letters)
>mm_chr7_105495801_105496697
Length = 897
Score = 801 bits (414), Expect = 0.0
Identities = 476/498 (95%), Gaps = 5/498 (1%)
Strand = Plus / Minus
Query: 4 ggaattccattctctgtgtagccacattcaaggccctgtaccttccataccgacaggacc 63
||||||||||||||||||||||||||||| || ||||||| |||||||||| ||||||||
Sbjct: 697 ggaattccattctctgtgtagccacattccagtccctgtatcttccataccaacaggacc 638
Query: 64 aaggcctctcagcaagagtagcagagaggcagaaactcccatccaagtgccatcaggcca 123
|||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 aagggcactcagaaagagtagcagagaggcagaaactcccatccaagtgccatcaggcca 578
Query: 124 actcacaagccacttatttatttatttttttgaacaagcccatcagggatgtgaaaggca 183
|||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||
Sbjct: 577 actcacaagccacttattcatttatttttttgaacaagcccaccaggaatgtgaaaggc- 519
Query: 184 gaagttttgtcactgcatgtgaagtccacacatacctagctccttccaaaggct-atgtc 242
|| ||||||||| ||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 518 --agctttgtcactacatgtgaagtccacacatacctagctccttccaaagg-tgatgtc 462
Query: 243 tatgacagtagaggtcaccagaggctaacgtggccccggccctggaaggtcaacattcct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 tatgacagtagaggtcaccagaggctaacgtggccccggccctggaaggtcaacattcct 402
Query: 303 tcttagctaacattcactagagagcaaatgcttatcctatcagtaatgaatcatggtctg 362
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||| | |
Sbjct: 401 tcttagctaacattcactagagagcaaatgtttatcctatcagtaatgaatcatggccag 342
Query: 363 tatccacaaagggaaggtgcccagtgccggccatgtctaccgtacactgctgcccagtca 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tatccacaaagggaaggtgcccagtgccggccatgtctaccgtacactgctgcccagtca 282
Query: 423 gcgtcccaggtaacaatcaatactgtgctctgagcccagcatttaatatccatcctcaac 482
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 281 gtgtcccaggtaacaatcaatactgtgctctgagctcagcatttaatatccatcctcaac 222
Query: 483 gtaccttccagctacagg 500
||||||||||||||||||
Sbjct: 221 gtaccttccagctacagg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 500
Length of database: 897
Length adjustment: 10
Effective length of query: 490
Effective length of database: 887
Effective search space: 434630
Effective search space used: 434630
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no085_o03.g1 MSMg01no085_o03.g1 CHROMAT_FILE:
MSMg01no085_o03.g1 PHD_FILE: MSMg01no085_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:37:16 2005
(329 letters)
>mm_chr7_105360507_105361235
Length = 729
Score = 601 bits (311), Expect = e-176
Identities = 323/327 (98%)
Strand = Plus / Plus
Query: 3 tctaaaaaaataaaaacctaagcattcttaggctgcgctttctgccctgactgctctcta 62
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 203 tctaaaaaaataaaaacctaagcattcttaggctgtgctttctgccctgactgttctcta 262
Query: 63 tcaaagaactactgcagtctactttaaggataaaacctaaagagaaaagagaccccattc 122
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tcaaagaactactgcagtctattttaaggataaaacctaaagagaaaagagaccccattc 322
Query: 123 taaactccccagttcacctaacagccttaccttgagtccttctcctctcactagcccttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 taaactccccagttcacctaacagccttaccttgagtccttctcctctcactagcccttt 382
Query: 183 cttctgtctcactgaggtagctttaattctagtgtgtagtaccttttgctgggtatagcc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 cttctgtctcactgaggtagctttaattctagtgtgtagtaccttttgctgggtatagcc 442
Query: 243 tattctgtgtcttatctgctcatggtaactttcatggcagcatcactgtcattttgtatt 302
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 443 tattctgtgtcttatctgctcatggtaactttcatggcagcatcattgtcattttgtatt 502
Query: 303 cagaaagaacaaaatgacaaaagtctg 329
|||||||||||||||||||||||||||
Sbjct: 503 cagaaagaacaaaatgacaaaagtctg 529
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 329
Length of database: 729
Length adjustment: 9
Effective length of query: 320
Effective length of database: 720
Effective search space: 230400
Effective search space used: 230400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
