Query= MSMg01no087_k10.b1 MSMg01no087_k10.b1 CHROMAT_FILE:
MSMg01no087_k10.b1 PHD_FILE: MSMg01no087_k10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:51 2005
(220 letters)
>mm_chr7_98824142_98824761
Length = 620
Score = 385 bits (199), Expect = e-111
Identities = 219/235 (93%), Gaps = 15/235 (6%)
Strand = Plus / Plus
Query: 1 cagtattagtgctggctttgcaaagaaacatgcccatcattgtttatatggcagttcttc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 186 cagtattagtgctggctttgcaaagaaacatgcccatcattgtttatctggcagttcttc 245
Query: 61 ctgcttcaggctgaatcaggagacacaacaaaaccatgggagcttggacttcataggttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 ctgcttcaggctgaatcaggagacacaacaaaaccatgggagcttggacttcataggttt 305
Query: 121 ttttt---------------cccaatttctccaccattcatagtttattcaactattata 165
||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ttttttttttttgtatttttcccaatttctccaccattcatagtttattcaactattata 365
Query: 166 tactaaatgcctatgatctagccctgtgtcatagcttgtggatattctaggaaac 220
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tactaaatgcctatgatctagccctgtgtcatagcttgtggatattctaggaaac 420
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 220
Length of database: 620
Length adjustment: 9
Effective length of query: 211
Effective length of database: 611
Effective search space: 128921
Effective search space used: 128921
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no087_k10.g1 MSMg01no087_k10.g1 CHROMAT_FILE:
MSMg01no087_k10.g1 PHD_FILE: MSMg01no087_k10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:39:51 2005
(398 letters)
>mm_chr7_98954010_98954809
Length = 800
Score = 253 bits (131), Expect = 1e-71
Identities = 145/151 (96%), Gaps = 4/151 (2%)
Strand = Plus / Minus
Query: 1 aggaataagttaagttagaggctctaacacttatttcctcattagaagaagagtgacggc 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 aggaataagttacgttagaggctctaacacttatttcctcattagaagaagagtgacggc 285
Query: 61 tgtgttctcttgatgagctctaagggg--aaaaaagtaagatacaaactctgttagcaga 118
||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||
Sbjct: 284 tgtgttctcttgatgagctctaagggggaaaaaaagtaagatacaaactctgttggcaga 225
Query: 119 gatttggtaaaaagaagaaaacgt--gacct 147
|||||||||||||||||||||||| |||||
Sbjct: 224 gatttggtaaaaagaagaaaacgtaagacct 194
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 398
Length of database: 800
Length adjustment: 9
Effective length of query: 389
Effective length of database: 791
Effective search space: 307699
Effective search space used: 307699
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
