Query= MSMg01no087_n13.b1 MSMg01no087_n13.b1 CHROMAT_FILE:
MSMg01no087_n13.b1 PHD_FILE: MSMg01no087_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:07 2005
(193 letters)
>mm_chr7_141445723_141446315
Length = 593
Score = 286 bits (148), Expect = 5e-82
Identities = 181/192 (94%)
Strand = Plus / Plus
Query: 2 ggagctgtccctcctgggacaatgcaccttgcctatgagtagagttgtattttctccaga 61
|||||||||||||||||||||||||||| ||||||||||| ||| |||||| ||||||||
Sbjct: 202 ggagctgtccctcctgggacaatgcaccctgcctatgagtggagatgtattctctccaga 261
Query: 62 gcctagagtttgtgacagatcaaaactgaataagcctcttctctgaacagatttcaagat 121
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 262 gcctagagtttgtgacagatcaaaactgaataagcctcttctctgaacagattccaagat 321
Query: 122 ttaaactatattgtacccttcaagtatcggcaacttcttcaattcctgcaactgataata 181
|||| ||||| |||||||||||| ||| | ||||||||||||||||||||||||||||||
Sbjct: 322 ttaagctatagtgtacccttcaaatattgacaacttcttcaattcctgcaactgataata 381
Query: 182 taatatttgtgg 193
|||| |||||||
Sbjct: 382 taatgtttgtgg 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 193
Length of database: 593
Length adjustment: 8
Effective length of query: 185
Effective length of database: 585
Effective search space: 108225
Effective search space used: 108225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no087_n13.g1 MSMg01no087_n13.g1 CHROMAT_FILE:
MSMg01no087_n13.g1 PHD_FILE: MSMg01no087_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:40:07 2005
(192 letters)
>mm_chr7_141584982_141585575
Length = 594
Score = 325 bits (168), Expect = 1e-93
Identities = 187/194 (96%), Gaps = 2/194 (1%)
Strand = Plus / Minus
Query: 1 attggatgcaccacaggatttttgcacatagctggctatctggaatgcttcaagctttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 attggatgcaccacaggatttttgcacatagctggctatctggaatgcttcaagctttct 335
Query: 61 gcccttgcaaattcaactgctggaaatactcaaacacaggtcttttgtacactcatattt 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 334 gcccttgcaaattcaactgctggaaatactcagacacaggtcttttgtacactcatattt 275
Query: 121 ctgtgacataattatataggagtataattttcaggacacacactcacac--tcacacatt 178
|||||| | || ||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 274 ctgtgagagaagtatataggagtataattttcaggacacacacacacacactcacacatt 215
Query: 179 gtatgctttgttag 192
||||||||||||||
Sbjct: 214 gtatgctttgttag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 192
Length of database: 594
Length adjustment: 8
Effective length of query: 184
Effective length of database: 586
Effective search space: 107824
Effective search space used: 107824
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
